Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | NSS78_RS00585 | Genome accession | NZ_CP151974 |
| Coordinates | 106684..109119 (+) | Length | 811 a.a. |
| NCBI ID | WP_003216969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL W8-0920 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 101684..114119
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSS78_RS00570 (NSS78_00570) | - | 104555..105019 (+) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
| NSS78_RS00575 (NSS78_00575) | - | 105034..105591 (+) | 558 | WP_212046628.1 | UvrB/UvrC motif-containing protein | - |
| NSS78_RS00580 (NSS78_00580) | - | 105596..106687 (+) | 1092 | WP_003217181.1 | protein arginine kinase | - |
| NSS78_RS00585 (NSS78_00585) | clpC | 106684..109119 (+) | 2436 | WP_003216969.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| NSS78_RS00590 (NSS78_00590) | radA | 109212..110591 (+) | 1380 | WP_034620767.1 | DNA repair protein RadA | Machinery gene |
| NSS78_RS00595 (NSS78_00595) | disA | 110594..111673 (+) | 1080 | WP_284906141.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| NSS78_RS00600 (NSS78_00600) | - | 111827..112927 (+) | 1101 | WP_003217214.1 | PIN/TRAM domain-containing protein | - |
| NSS78_RS00605 (NSS78_00605) | ispD | 112941..113630 (+) | 690 | WP_003217158.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| NSS78_RS00610 (NSS78_00610) | ispF | 113634..114110 (+) | 477 | WP_003216928.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90030.78 Da Isoelectric Point: 6.1821
>NTDB_id=982820 NSS78_RS00585 WP_003216969.1 106684..109119(+) (clpC) [Bacillus sp. FSL W8-0920]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQQIVLDVEDG
EIVVKTTAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQQIVLDVEDG
EIVVKTTAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=982820 NSS78_RS00585 WP_003216969.1 106684..109119(+) (clpC) [Bacillus sp. FSL W8-0920]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATTGGTACTGAACACATTTTACTTGGTCTAGTTCGTGAGGGTGAGGGCATCGCCGCAAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGCGTGTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGCAGCAATGAAACAGGTGCATCTGCCGCTGGCTCTAACAGCAATGCAAAT
ACACCAACATTAGATAGCTTGGCAAGAGATTTAACAGCGATTGCGAAAGAAGATAGCTTGGACCCTGTCATTGGACGAAG
CAAAGAAATTCAGCGTGTCATCGAGGTTTTAAGCAGAAGAACAAAGAATAACCCTGTGCTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATTGCTGAAGGTCTGGCACAGCAAATTATTCATAATGAAGTGCCTGAAATCCTGCGCGATAAACGAGTG
ATGACGCTTGATATGGGAACTGTTGTAGCGGGAACGAAATATCGTGGTGAATTTGAGGATCGCTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTCATTGATGAGCTTCATACATTGATTGGTGCTGGTGGAGCAGAGGGTG
CGATTGACGCATCTAATATTCTCAAACCATCCTTAGCACGTGGAGAGCTTCAATGTATTGGGGCGACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCATCTGTTGATGA
AAGTATTCAAATTTTAAGAGGACTTAGAGATCGTTATGAGGCACATCACCGTGTGTCCATTACAGATGAAGCGATTGAGG
CGGCGGTGAAGTTATCTGACCGTTATATATCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGG
TCGAAAGTCCGCTTACGTTCTTTCACAACACCGCCTAACCTAAAAGAACTAGAACAAAAGCTAGACGAAGTACGCAAGGA
AAAGGATGCGGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCTTGGAAAGAAAAGCAAGGTCAGGAGAATTCAGAGGTATCAGTGGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCCCAAACCGAAACAGATAAGCTTCTAAATATGGAACAATTACT
CCATTCTCGTGTAATTGGGCAGGATGAAGCAGTTGTCGCTGTAGCAAAAGCTGTGAGACGTGCGCGTGCTGGCTTAAAAG
ATCCAAAACGTCCAATCGGCTCATTTATCTTCTTAGGCCCAACAGGAGTTGGTAAAACGGAGCTTGCAAGAGCACTCGCA
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATCGATATGTCTGAATACATGGAGAAACACTCTACATCTAGACT
TGTTGGGTCACCTCCAGGCTATGTTGGCTATGAAGAAGGCGGACAACTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TTGTGCTTTTAGATGAGATTGAAAAGGCGCATCCAGATGTATTCAACATCTTACTGCAAGTGTTAGAGGATGGTCGTCTG
ACTGATTCTAAAGGGCGTACTGTTGACTTTAGAAACACGATTTTAATCATGACATCCAACGTTGGAGCTAGTGAACTGAA
GCGAAATAAATATGTTGGCTTTAATGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCAGAATTCATCAACCGTATTGATGAAATCATTGTCTTCCATTCTCTTGAAAAGAAACATCTA
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACGAAACGATTAAAAGAACAAGACCTTTCAATCGAATTGACAGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGACCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAAGATCGACTTTCTGAGGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACAAATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAACGACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATTGGTACTGAACACATTTTACTTGGTCTAGTTCGTGAGGGTGAGGGCATCGCCGCAAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGCGTGTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGCAGCAATGAAACAGGTGCATCTGCCGCTGGCTCTAACAGCAATGCAAAT
ACACCAACATTAGATAGCTTGGCAAGAGATTTAACAGCGATTGCGAAAGAAGATAGCTTGGACCCTGTCATTGGACGAAG
CAAAGAAATTCAGCGTGTCATCGAGGTTTTAAGCAGAAGAACAAAGAATAACCCTGTGCTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATTGCTGAAGGTCTGGCACAGCAAATTATTCATAATGAAGTGCCTGAAATCCTGCGCGATAAACGAGTG
ATGACGCTTGATATGGGAACTGTTGTAGCGGGAACGAAATATCGTGGTGAATTTGAGGATCGCTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTCATTGATGAGCTTCATACATTGATTGGTGCTGGTGGAGCAGAGGGTG
CGATTGACGCATCTAATATTCTCAAACCATCCTTAGCACGTGGAGAGCTTCAATGTATTGGGGCGACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCATCTGTTGATGA
AAGTATTCAAATTTTAAGAGGACTTAGAGATCGTTATGAGGCACATCACCGTGTGTCCATTACAGATGAAGCGATTGAGG
CGGCGGTGAAGTTATCTGACCGTTATATATCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGG
TCGAAAGTCCGCTTACGTTCTTTCACAACACCGCCTAACCTAAAAGAACTAGAACAAAAGCTAGACGAAGTACGCAAGGA
AAAGGATGCGGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCTTGGAAAGAAAAGCAAGGTCAGGAGAATTCAGAGGTATCAGTGGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCCCAAACCGAAACAGATAAGCTTCTAAATATGGAACAATTACT
CCATTCTCGTGTAATTGGGCAGGATGAAGCAGTTGTCGCTGTAGCAAAAGCTGTGAGACGTGCGCGTGCTGGCTTAAAAG
ATCCAAAACGTCCAATCGGCTCATTTATCTTCTTAGGCCCAACAGGAGTTGGTAAAACGGAGCTTGCAAGAGCACTCGCA
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATCGATATGTCTGAATACATGGAGAAACACTCTACATCTAGACT
TGTTGGGTCACCTCCAGGCTATGTTGGCTATGAAGAAGGCGGACAACTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TTGTGCTTTTAGATGAGATTGAAAAGGCGCATCCAGATGTATTCAACATCTTACTGCAAGTGTTAGAGGATGGTCGTCTG
ACTGATTCTAAAGGGCGTACTGTTGACTTTAGAAACACGATTTTAATCATGACATCCAACGTTGGAGCTAGTGAACTGAA
GCGAAATAAATATGTTGGCTTTAATGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCAGAATTCATCAACCGTATTGATGAAATCATTGTCTTCCATTCTCTTGAAAAGAAACATCTA
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACGAAACGATTAAAAGAACAAGACCTTTCAATCGAATTGACAGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGACCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAAGATCGACTTTCTGAGGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACAAATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAACGACGGCTGCTACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
95.931 |
100 |
0.959 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.136 |
99.877 |
0.491 |
| clpC | Streptococcus thermophilus LMD-9 |
46.247 |
100 |
0.471 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.884 |
100 |
0.467 |
| clpC | Streptococcus pneumoniae Rx1 |
45.802 |
99.877 |
0.457 |
| clpC | Streptococcus pneumoniae D39 |
45.802 |
99.877 |
0.457 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.802 |
99.877 |
0.457 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.509 |
87.916 |
0.435 |
| clpE | Streptococcus mutans UA159 |
53.478 |
79.778 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.713 |
79.531 |
0.419 |