Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | NSS78_RS00255 | Genome accession | NZ_CP151974 |
| Coordinates | 47052..47342 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL W8-0920 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 42052..52342
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSS78_RS00215 (NSS78_00215) | - | 42087..42416 (+) | 330 | WP_012008640.1 | cyclic-di-AMP receptor | - |
| NSS78_RS00220 (NSS78_00220) | - | 42429..42869 (+) | 441 | WP_003217911.1 | DUF327 family protein | - |
| NSS78_RS00225 (NSS78_00225) | holB | 42881..43870 (+) | 990 | WP_327840476.1 | DNA polymerase III subunit delta' | - |
| NSS78_RS00230 (NSS78_00230) | - | 43873..44700 (+) | 828 | WP_003217932.1 | stage 0 sporulation family protein | - |
| NSS78_RS00235 (NSS78_00235) | yabA | 44715..45068 (+) | 354 | WP_003217957.1 | DNA replication initiation control protein YabA | - |
| NSS78_RS00240 (NSS78_00240) | - | 45124..45867 (+) | 744 | WP_268459713.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| NSS78_RS00245 (NSS78_00245) | - | 45854..46150 (+) | 297 | WP_003217970.1 | GIY-YIG nuclease family protein | - |
| NSS78_RS00250 (NSS78_00250) | rsmI | 46128..47006 (+) | 879 | WP_342468257.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| NSS78_RS00255 (NSS78_00255) | abrB | 47052..47342 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| NSS78_RS00260 (NSS78_00260) | metG | 47861..49861 (+) | 2001 | WP_212046563.1 | methionine--tRNA ligase | - |
| NSS78_RS00265 (NSS78_00265) | - | 49943..50710 (+) | 768 | WP_050945797.1 | TatD family hydrolase | - |
| NSS78_RS00270 (NSS78_00270) | - | 50955..52157 (+) | 1203 | WP_106030286.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=982819 NSS78_RS00255 WP_087975202.1 47052..47342(-) (abrB) [Bacillus sp. FSL W8-0920]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=982819 NSS78_RS00255 WP_087975202.1 47052..47342(-) (abrB) [Bacillus sp. FSL W8-0920]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGGCGCGTGGTGATTCCAATCGAACTTCGCCGTAC
TCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGGCGCGTGGTGATTCCAATCGAACTTCGCCGTAC
TCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |