Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   NSQ52_RS15190 Genome accession   NZ_CP151973
Coordinates   2936221..2936361 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus sp. FSL W8-1141     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2931221..2941361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ52_RS15165 (NSQ52_15165) - 2931543..2931932 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  NSQ52_RS15170 (NSQ52_15170) comA 2931956..2932597 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  NSQ52_RS15175 (NSQ52_15175) comP 2932678..2934984 (-) 2307 WP_073412603.1 ATP-binding protein Regulator
  NSQ52_RS15180 (NSQ52_15180) comX 2934998..2935168 (-) 171 WP_017358941.1 competence pheromone ComX -
  NSQ52_RS15185 (NSQ52_15185) - 2935146..2936069 (-) 924 WP_008345863.1 polyprenyl synthetase family protein -
  NSQ52_RS15190 (NSQ52_15190) degQ 2936221..2936361 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NSQ52_RS15195 (NSQ52_15195) - 2936867..2937220 (+) 354 WP_017367963.1 hypothetical protein -
  NSQ52_RS15200 (NSQ52_15200) - 2937257..2938483 (-) 1227 WP_035701209.1 HDOD domain-containing protein -
  NSQ52_RS15205 (NSQ52_15205) - 2938624..2940093 (-) 1470 WP_007500472.1 nicotinate phosphoribosyltransferase -
  NSQ52_RS15210 (NSQ52_15210) - 2940111..2940662 (-) 552 WP_008345872.1 isochorismatase family cysteine hydrolase -
  NSQ52_RS15215 (NSQ52_15215) - 2940723..2941130 (-) 408 WP_007500468.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=982804 NSQ52_RS15190 WP_003213123.1 2936221..2936361(-) (degQ) [Bacillus sp. FSL W8-1141]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=982804 NSQ52_RS15190 WP_003213123.1 2936221..2936361(-) (degQ) [Bacillus sp. FSL W8-1141]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAACTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696

Multiple sequence alignment