Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSQ52_RS06985 Genome accession   NZ_CP151973
Coordinates   1377794..1378375 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus sp. FSL W8-1141     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1372794..1383375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ52_RS06960 (NSQ52_06960) - 1373460..1374638 (+) 1179 WP_268389761.1 N-acetyldiaminopimelate deacetylase -
  NSQ52_RS06965 (NSQ52_06965) - 1374689..1374931 (+) 243 WP_024424725.1 YkuS family protein -
  NSQ52_RS06970 (NSQ52_06970) - 1374954..1375763 (-) 810 WP_342474021.1 mechanosensitive ion channel family protein -
  NSQ52_RS06975 (NSQ52_06975) ahpA 1376035..1376577 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  NSQ52_RS06980 (NSQ52_06980) - 1376854..1377312 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  NSQ52_RS06985 (NSQ52_06985) rok 1377794..1378375 (+) 582 WP_007498648.1 hypothetical protein Regulator
  NSQ52_RS06990 (NSQ52_06990) - 1378438..1379355 (-) 918 WP_041507373.1 hypothetical protein -
  NSQ52_RS06995 (NSQ52_06995) - 1379439..1380020 (+) 582 WP_208755865.1 molybdenum cofactor guanylyltransferase -
  NSQ52_RS07000 (NSQ52_07000) - 1380050..1381066 (+) 1017 WP_342474022.1 thiazole biosynthesis adenylyltransferase ThiF -
  NSQ52_RS07005 (NSQ52_07005) glp 1381076..1382350 (+) 1275 WP_342474023.1 gephyrin-like molybdotransferase Glp -
  NSQ52_RS07010 (NSQ52_07010) mobB 1382332..1382859 (+) 528 WP_024719560.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NSQ52_RS07015 (NSQ52_07015) - 1382852..1383343 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=982780 NSQ52_RS06985 WP_007498648.1 1377794..1378375(+) (rok) [Bacillus sp. FSL W8-1141]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=982780 NSQ52_RS06985 WP_007498648.1 1377794..1378375(+) (rok) [Bacillus sp. FSL W8-1141]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment