Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NSQ52_RS06865 Genome accession   NZ_CP151973
Coordinates   1359302..1359763 (-) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus sp. FSL W8-1141     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1354302..1364763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ52_RS06840 (NSQ52_06840) - 1354908..1355792 (+) 885 WP_039169114.1 cation diffusion facilitator family transporter -
  NSQ52_RS06845 (NSQ52_06845) - 1355857..1356009 (-) 153 WP_017367142.1 hypothetical protein -
  NSQ52_RS06850 (NSQ52_06850) - 1356310..1356849 (+) 540 WP_045035146.1 RDD family protein -
  NSQ52_RS06855 (NSQ52_06855) - 1356974..1358284 (+) 1311 WP_144678869.1 MFS transporter -
  NSQ52_RS06860 (NSQ52_06860) - 1358358..1359266 (+) 909 WP_024719666.1 chemotaxis protein -
  NSQ52_RS06865 (NSQ52_06865) kre 1359302..1359763 (-) 462 WP_007498684.1 YkyB family protein Regulator
  NSQ52_RS06870 (NSQ52_06870) - 1360241..1360456 (-) 216 WP_058337408.1 hypothetical protein -
  NSQ52_RS06875 (NSQ52_06875) - 1360622..1360798 (+) 177 WP_173407972.1 hypothetical protein -
  NSQ52_RS06880 (NSQ52_06880) - 1360866..1362143 (-) 1278 WP_083588753.1 MFS transporter -
  NSQ52_RS06885 (NSQ52_06885) - 1362217..1362714 (-) 498 WP_041092399.1 L,D-transpeptidase family protein -
  NSQ52_RS06890 (NSQ52_06890) - 1362871..1363728 (-) 858 WP_035700578.1 metallophosphoesterase -
  NSQ52_RS06895 (NSQ52_06895) fadH 1363868..1364632 (+) 765 WP_019743904.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=982779 NSQ52_RS06865 WP_007498684.1 1359302..1359763(-) (kre) [Bacillus sp. FSL W8-1141]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=982779 NSQ52_RS06865 WP_007498684.1 1359302..1359763(-) (kre) [Bacillus sp. FSL W8-1141]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATCGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCAAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771

Multiple sequence alignment