Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NSQ52_RS05695 Genome accession   NZ_CP151973
Coordinates   1142867..1143064 (+) Length   65 a.a.
NCBI ID   WP_024720057.1    Uniprot ID   -
Organism   Bacillus sp. FSL W8-1141     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1137867..1148064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ52_RS05665 (NSQ52_05665) - 1138267..1138446 (+) 180 WP_008348517.1 YjzC family protein -
  NSQ52_RS05670 (NSQ52_05670) - 1138616..1139881 (+) 1266 WP_007499050.1 MFS transporter -
  NSQ52_RS05675 (NSQ52_05675) - 1140001..1140195 (-) 195 WP_024720055.1 YjzD family protein -
  NSQ52_RS05680 (NSQ52_05680) - 1140408..1141148 (+) 741 WP_326242248.1 hypothetical protein -
  NSQ52_RS05685 (NSQ52_05685) - 1141224..1141799 (+) 576 WP_041093111.1 hypothetical protein -
  NSQ52_RS05690 (NSQ52_05690) med 1141890..1142855 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  NSQ52_RS05695 (NSQ52_05695) comZ 1142867..1143064 (+) 198 WP_024720057.1 ComZ family protein Regulator
  NSQ52_RS05700 (NSQ52_05700) - 1143077..1143310 (-) 234 WP_008348506.1 hypothetical protein -
  NSQ52_RS05705 (NSQ52_05705) - 1143480..1144418 (+) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  NSQ52_RS05710 (NSQ52_05710) fabF 1144440..1145681 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  NSQ52_RS05715 (NSQ52_05715) - 1145759..1146553 (+) 795 WP_056407963.1 DUF2268 domain-containing protein -
  NSQ52_RS05720 (NSQ52_05720) - 1146724..1147704 (+) 981 WP_047945538.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7319.36 Da        Isoelectric Point: 4.2259

>NTDB_id=982771 NSQ52_RS05695 WP_024720057.1 1142867..1143064(+) (comZ) [Bacillus sp. FSL W8-1141]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPEALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=982771 NSQ52_RS05695 WP_024720057.1 1142867..1143064(+) (comZ) [Bacillus sp. FSL W8-1141]
ATGCAACACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCAGAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment