Detailed information NTG0982710

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NST70_RS09855
• Genome accession: NZ_CP151971
• Coordinates: 2056829..2059252 (-)
• Length: 807 a.a.
• NCBI ID: WP_342474927.1
• Uniprot ID: -
• Organism: Weizmannia sp. FSL K6-0777
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2051829..2064252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NST70_RS09820 (NST70_09820)	-	2053173..2054264 (-)	1092	WP_014097920.1	AI-2E family transporter	-
NST70_RS09825 (NST70_09825)	-	2054526..2054657 (-)	132	WP_014097919.1	DUF3918 family protein	-
NST70_RS09830 (NST70_09830)	-	2054675..2054887 (-)	213	WP_026104525.1	hypothetical protein	-
NST70_RS09835 (NST70_09835)	-	2055046..2055486 (+)	441	WP_026104526.1	YndM family protein	-
NST70_RS09840 (NST70_09840)	-	2055525..2055875 (-)	351	WP_017550592.1	Lrp/AsnC family transcriptional regulator	-
NST70_RS09845 (NST70_09845)	-	2055882..2055986 (-)	105	WP_014097915.1	AsnC family transcriptional regulator	-
NST70_RS09850 (NST70_09850)	-	2056318..2056662 (+)	345	Protein_1922	Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein	-
NST70_RS09855 (NST70_09855)	recD2	2056829..2059252 (-)	2424	WP_342474927.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NST70_RS09860 (NST70_09860)	-	2059263..2059931 (-)	669	WP_342474928.1	tetratricopeptide repeat protein	-
NST70_RS09865 (NST70_09865)	mnmA	2060316..2061431 (-)	1116	WP_061086590.1	tRNA 2-thiouridine(34) synthase MnmA	-
NST70_RS09870 (NST70_09870)	-	2061447..2062592 (-)	1146	WP_035184531.1	cysteine desulfurase family protein	-
NST70_RS09875 (NST70_09875)	-	2062613..2063032 (-)	420	WP_014097908.1	Rrf2 family transcriptional regulator	-
NST70_RS09880 (NST70_09880)	-	2063345..2064013 (-)	669	WP_342474930.1	cell surface protein	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 90663.70 Da
• Isoelectric Point: 4.8273

>NTDB_id=982710 NST70_RS09855 WP_342474927.1 2056829..2059252(-) (recD2) [Weizmannia sp. FSL K6-0777]
MEKQHAMDLFQDEENFIKGKHLATIFHNEQNLYSVIRVRVEETNIGLEDKETVITGYFPRIHEQETYTFFGKMQEHPKFG
PQFQANRFQKDIPNTKQGVVEYLSSDLFNGIGKKTAERIVGVLGENAISKILENPAALDEVPKLAPEKAQLIHDTLVEHQ
GLERVMIGLAQYGFGPQIAMRIYQVYEDEALEMIAQNPYRLVDDIKGIGFGRADELGRQLGISGTHPHRIQAGCCYMLEM
ESMQHGHVYVLKEELAQDIKALLEEYQNVEIPVGLIENELVKLQEESKVIMEEDKVYLPSLYFSEKGIVSNIERIMSQTE
YAEQFPESEFLLALGSLEERLGVEYAPSQKEAIQKALMSPMMILTGGPGTGKTTVIKGIVELYGELHGVSLDPQTYKKDE
AFPIVLAAPTGRAAKRMAESTGLPAMTIHRLLGMTGMEDLDDSEERQVEGKLVIIDEMSMVDTWLANQLLKALPDEIQVI
MVGDEDQLPSVGPGQVLKDLLKSGAIPVVRLTDIYRQKDGSSIIELAHHVKNGRIPENIFQMQADRSFIRCSSGQVAEAV
EKVVKSAKRKGYTAKDIQVLAPMYRGPAGIDRLNSLLQNIFNPNENGARKELKHGDAVYRIGDKVLQLVNQPEHGVYNGD
IGEIVSLFTAKENTEKQDMLIVSFDGIEVTYTKPDFNQITLAYCCSIHKSQGSEFPVVILPVVRSYYRMLRRNLLYTAIT
RSKKILILLGEEPAFRMGVEREDDQKRKTTLCEKLAEALKTEQKEAGTETVLSLTEENWDRVDPMIGMEGITPYTYAEEG
QTASQPD

Nucleotide

• Length: 2424 bp

>NTDB_id=982710 NST70_RS09855 WP_342474927.1 2056829..2059252(-) (recD2) [Weizmannia sp. FSL K6-0777]
TTGGAAAAACAGCATGCGATGGATTTATTCCAGGACGAGGAAAATTTTATAAAAGGAAAGCATCTCGCGACCATCTTCCA
TAACGAGCAAAATTTGTATTCCGTCATCCGTGTGCGGGTGGAAGAGACCAATATCGGGCTGGAAGATAAGGAAACGGTGA
TTACCGGCTATTTTCCGCGCATCCATGAACAGGAAACGTACACCTTTTTTGGAAAAATGCAGGAACACCCGAAATTCGGC
CCCCAGTTCCAGGCAAACCGCTTCCAAAAAGACATCCCCAATACAAAGCAGGGTGTTGTTGAGTATCTTTCCAGTGATTT
ATTCAACGGCATCGGCAAAAAAACGGCGGAGCGGATCGTTGGCGTGCTCGGTGAAAATGCGATCAGCAAAATATTGGAAA
ATCCCGCCGCCCTTGACGAAGTACCAAAACTGGCGCCGGAAAAAGCACAGCTGATCCATGATACGTTGGTTGAACACCAG
GGGCTTGAACGTGTCATGATCGGGCTTGCGCAATACGGTTTCGGGCCGCAGATTGCGATGCGCATTTACCAGGTTTACGA
GGATGAGGCGCTCGAAATGATCGCACAAAATCCGTACCGGCTCGTCGATGATATCAAAGGCATCGGTTTCGGGCGGGCCG
ATGAACTCGGCCGGCAGCTCGGCATCAGCGGGACGCATCCGCACCGCATCCAGGCCGGCTGCTGTTACATGCTGGAAATG
GAAAGCATGCAGCACGGCCATGTGTACGTCCTGAAAGAAGAACTTGCGCAGGATATCAAAGCCCTTTTGGAAGAGTACCA
GAATGTTGAAATCCCGGTCGGCCTGATTGAAAATGAGCTGGTAAAACTGCAGGAAGAGAGCAAAGTGATCATGGAAGAAG
ACAAAGTCTATCTTCCGTCCCTCTATTTTTCGGAAAAAGGAATCGTTTCCAATATTGAGCGGATAATGTCGCAAACCGAG
TATGCGGAACAGTTCCCGGAGTCGGAATTCCTGCTTGCCCTGGGCAGCCTTGAAGAACGGCTCGGCGTCGAGTATGCCCC
GTCGCAAAAGGAAGCCATCCAAAAAGCGCTGATGAGCCCGATGATGATTTTAACGGGCGGGCCCGGCACAGGGAAAACAA
CGGTCATTAAAGGGATTGTGGAACTGTACGGCGAATTGCACGGCGTTTCGCTTGACCCGCAAACCTATAAAAAAGATGAG
GCATTTCCGATTGTCCTCGCGGCGCCGACAGGAAGGGCCGCGAAAAGAATGGCGGAGTCAACCGGTCTGCCGGCAATGAC
AATCCACCGCCTGCTCGGCATGACCGGCATGGAGGACCTAGACGATTCAGAGGAACGGCAGGTAGAAGGCAAGCTCGTCA
TTATTGATGAAATGTCGATGGTCGATACATGGCTTGCAAACCAGCTGTTAAAGGCGCTGCCGGATGAAATCCAGGTCATT
ATGGTCGGGGATGAAGACCAGCTGCCGTCCGTCGGTCCGGGCCAGGTGCTGAAAGATTTATTGAAATCGGGTGCCATCCC
GGTTGTCAGGCTGACAGACATATACAGGCAGAAAGATGGTTCTTCGATTATTGAACTGGCCCACCATGTCAAAAATGGGC
GTATTCCGGAAAATATTTTTCAAATGCAGGCGGACCGTTCGTTTATCCGCTGTTCTTCCGGGCAGGTGGCAGAAGCGGTG
GAAAAAGTGGTGAAAAGCGCGAAACGGAAAGGCTATACGGCAAAAGACATCCAGGTGCTGGCGCCGATGTACAGGGGGCC
GGCCGGCATTGACCGCCTGAACAGCCTTTTGCAAAATATTTTTAATCCGAATGAGAACGGCGCCCGCAAAGAGCTGAAGC
ACGGGGACGCGGTTTACCGGATCGGCGATAAGGTGCTGCAGCTTGTCAACCAGCCGGAACACGGAGTGTATAACGGCGAT
ATCGGCGAGATTGTCTCCCTTTTTACCGCAAAAGAAAATACGGAAAAACAAGATATGCTCATCGTTTCTTTTGACGGGAT
TGAAGTGACGTATACGAAGCCTGATTTCAACCAGATTACGCTTGCGTATTGCTGTTCGATCCATAAATCGCAAGGAAGCG
AGTTCCCGGTAGTGATTTTGCCGGTTGTCCGCAGCTATTACCGGATGCTGCGCCGAAACTTGCTGTATACTGCGATCACA
AGAAGCAAAAAAATTTTAATTCTGCTTGGCGAAGAACCGGCTTTCCGGATGGGTGTGGAAAGGGAAGATGACCAAAAACG
GAAGACGACACTGTGTGAAAAACTGGCTGAAGCATTAAAAACGGAACAAAAAGAGGCAGGGACGGAGACAGTCCTGTCCT
TAACAGAAGAAAATTGGGACCGGGTCGACCCGATGATTGGCATGGAGGGCATTACCCCGTACACGTACGCGGAAGAAGGA
CAGACTGCGTCCCAACCGGATTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-664)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	60.549	99.257	0.601