Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NSS65_RS11565 | Genome accession | NZ_CP151970 |
| Coordinates | 2246520..2246855 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-1006 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2241520..2251855
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSS65_RS11545 (NSS65_11545) | gcvT | 2241997..2243094 (-) | 1098 | WP_101676874.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NSS65_RS11550 (NSS65_11550) | - | 2243656..2245326 (+) | 1671 | WP_034280230.1 | SNF2-related protein | - |
| NSS65_RS11555 (NSS65_11555) | - | 2245341..2246138 (+) | 798 | WP_034280228.1 | YqhG family protein | - |
| NSS65_RS11560 (NSS65_11560) | - | 2246322..2246486 (+) | 165 | WP_075623492.1 | anti-repressor SinI family protein | - |
| NSS65_RS11565 (NSS65_11565) | sinR | 2246520..2246855 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| NSS65_RS11570 (NSS65_11570) | - | 2246923..2247723 (-) | 801 | WP_034280222.1 | TasA family protein | - |
| NSS65_RS11575 (NSS65_11575) | - | 2247781..2248353 (-) | 573 | WP_034280218.1 | signal peptidase I | - |
| NSS65_RS11580 (NSS65_11580) | tapA | 2248406..2248933 (-) | 528 | WP_144496218.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSS65_RS11585 (NSS65_11585) | - | 2249234..2249512 (+) | 279 | WP_061109527.1 | DUF3889 domain-containing protein | - |
| NSS65_RS11590 (NSS65_11590) | - | 2249547..2249741 (-) | 195 | WP_024422974.1 | YqzE family protein | - |
| NSS65_RS11595 (NSS65_11595) | comGG | 2249801..2250184 (-) | 384 | WP_144496219.1 | competence type IV pilus minor pilin ComGG | - |
| NSS65_RS11600 (NSS65_11600) | comGF | 2250181..2250708 (-) | 528 | WP_326134811.1 | competence type IV pilus minor pilin ComGF | - |
| NSS65_RS11605 (NSS65_11605) | comGE | 2250620..2250934 (-) | 315 | WP_264315972.1 | competence type IV pilus minor pilin ComGE | - |
| NSS65_RS11610 (NSS65_11610) | comGD | 2250918..2251364 (-) | 447 | WP_326134812.1 | competence type IV pilus minor pilin ComGD | - |
| NSS65_RS11615 (NSS65_11615) | comGC | 2251357..2251650 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=982652 NSS65_RS11565 WP_024422969.1 2246520..2246855(+) (sinR) [Bacillus sp. FSL K6-1006]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=982652 NSS65_RS11565 WP_024422969.1 2246520..2246855(+) (sinR) [Bacillus sp. FSL K6-1006]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |