Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   NSS65_RS08995 Genome accession   NZ_CP151970
Coordinates   1759419..1759847 (+) Length   142 a.a.
NCBI ID   WP_186365586.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1006     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1754419..1764847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS65_RS08985 (NSS65_08985) - 1754962..1758105 (+) 3144 WP_144496660.1 bifunctional cytochrome P450/NADPH--P450 reductase -
  NSS65_RS08990 (NSS65_08990) - 1758299..1759207 (+) 909 WP_024425124.1 trypsin-like serine protease -
  NSS65_RS08995 (NSS65_08995) nucA/comI 1759419..1759847 (+) 429 WP_186365586.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  NSS65_RS09000 (NSS65_09000) - 1759993..1760841 (+) 849 WP_041117519.1 STAS domain-containing protein -
  NSS65_RS09005 (NSS65_09005) - 1760874..1761416 (-) 543 WP_041109224.1 IseA DL-endopeptidase inhibitor family protein -
  NSS65_RS09010 (NSS65_09010) - 1761712..1762164 (+) 453 WP_070325869.1 hypothetical protein -
  NSS65_RS09015 (NSS65_09015) lexA 1762210..1762830 (-) 621 WP_034283422.1 transcriptional repressor LexA -
  NSS65_RS09020 (NSS65_09020) yneA 1762989..1763300 (+) 312 WP_034283425.1 cell division suppressor protein YneA -
  NSS65_RS09025 (NSS65_09025) - 1763318..1763965 (+) 648 WP_034283427.1 recombinase family protein -
  NSS65_RS09030 (NSS65_09030) - 1764035..1764265 (+) 231 WP_034283429.1 DUF896 domain-containing protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15672.88 Da        Isoelectric Point: 9.5681

>NTDB_id=982648 NSS65_RS08995 WP_186365586.1 1759419..1759847(+) (nucA/comI) [Bacillus sp. FSL K6-1006]
MKRGWIAAVALCFVIWMGTLLGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQES
LKGIPTKPGFDRDEWPMAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISRFPDGKRILFIVK

Nucleotide


Download         Length: 429 bp        

>NTDB_id=982648 NSS65_RS08995 WP_186365586.1 1759419..1759847(+) (nucA/comI) [Bacillus sp. FSL K6-1006]
ATGAAAAGAGGCTGGATCGCTGCTGTCGCCTTATGTTTTGTGATATGGATGGGCACGTTGTTAGGTGGATTTGGAGAGAA
GCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTCGTTCAATTTCCAAAGGAAAGGTACCCTGAAACAGGCAGTCATA
TTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACCGAAATGGAGCAGATGCCCGCAGGCAAGAATCA
TTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCAATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGC
AAGCGTTCAATATGTCAGTCCATCTGATAATAGGGGAGCAGGCTCATGGGTCGGACACCAAATCAGCAGGTTTCCTGATG
GGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(45-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

83.803

0.486

Multiple sequence alignment