Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NSS65_RS04115 Genome accession   NZ_CP151970
Coordinates   835157..835948 (+) Length   263 a.a.
NCBI ID   WP_284384722.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1006     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 830157..840948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS65_RS04080 (NSS65_04080) - 830243..830791 (+) 549 WP_034283751.1 thioredoxin family protein -
  NSS65_RS04085 (NSS65_04085) - 831125..831592 (+) 468 WP_041116252.1 DUF393 domain-containing protein -
  NSS65_RS04090 (NSS65_04090) - 831629..832885 (-) 1257 WP_034283753.1 transcriptional regulator -
  NSS65_RS04095 (NSS65_04095) - 833160..833747 (+) 588 WP_046314306.1 nitroreductase -
  NSS65_RS04100 (NSS65_04100) - 833786..833941 (-) 156 WP_024425223.1 YfhD family protein -
  NSS65_RS04105 (NSS65_04105) - 834003..834113 (-) 111 WP_017358836.1 YfhE family protein -
  NSS65_RS04110 (NSS65_04110) - 834166..835062 (-) 897 WP_251232604.1 TIGR01777 family oxidoreductase -
  NSS65_RS04115 (NSS65_04115) recX 835157..835948 (+) 792 WP_284384722.1 recombination regulator RecX Regulator
  NSS65_RS04120 (NSS65_04120) - 835952..836266 (+) 315 WP_251232603.1 YfhH family protein -
  NSS65_RS04125 (NSS65_04125) - 836290..836463 (-) 174 WP_008360604.1 YpzG family protein -
  NSS65_RS04130 (NSS65_04130) - 836489..836638 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  NSS65_RS04135 (NSS65_04135) - 836755..837027 (+) 273 WP_024425219.1 YfhJ family protein -
  NSS65_RS04140 (NSS65_04140) - 837328..838311 (+) 984 WP_284384723.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30679.10 Da        Isoelectric Point: 6.3779

>NTDB_id=982625 NSS65_RS04115 WP_284384722.1 835157..835948(+) (recX) [Bacillus sp. FSL K6-1006]
MPYITKISAQKNNTERVNIFLDEKYDFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=982625 NSS65_RS04115 WP_284384722.1 835157..835948(+) (recX) [Bacillus sp. FSL K6-1006]
ATGCCTTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGACTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTTGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCAGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGCAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCGCTGTCGCAATACCCTGATGACCTACAGCTGGAGGAA
GCTGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTACAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635

Multiple sequence alignment