Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSS77_RS07390 Genome accession   NZ_CP151969
Coordinates   1502899..1503852 (+) Length   317 a.a.
NCBI ID   WP_342471020.1    Uniprot ID   -
Organism   Ureibacillus sp. FSL K6-3587     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1497899..1508852
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS77_RS07375 (NSS77_07375) - 1497920..1499566 (+) 1647 WP_342471017.1 IS1182 family transposase -
  NSS77_RS07380 (NSS77_07380) hflX 1499649..1500929 (+) 1281 WP_342471018.1 GTPase HflX -
  NSS77_RS07385 (NSS77_07385) - 1501220..1502707 (+) 1488 WP_342471019.1 peptide MFS transporter -
  NSS77_RS07390 (NSS77_07390) ceuB 1502899..1503852 (+) 954 WP_342471020.1 ABC transporter permease Machinery gene
  NSS77_RS07395 (NSS77_07395) - 1503842..1504798 (+) 957 WP_342471021.1 iron chelate uptake ABC transporter family permease subunit -
  NSS77_RS07400 (NSS77_07400) - 1504795..1505562 (+) 768 WP_342471022.1 ABC transporter ATP-binding protein -
  NSS77_RS07405 (NSS77_07405) - 1505729..1506757 (+) 1029 WP_342471023.1 siderophore ABC transporter substrate-binding protein -
  NSS77_RS07410 (NSS77_07410) - 1506927..1508129 (+) 1203 WP_027725900.1 transposase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34842.12 Da        Isoelectric Point: 9.5266

>NTDB_id=982601 NSS77_RS07390 WP_342471020.1 1502899..1503852(+) (ceuB) [Ureibacillus sp. FSL K6-3587]
MRLWMLILTAIILSLVSLFIGAIDIKPTDLLDWESQQTQIFLISRVPRLMAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGILISILLFSQAAYMEKILFSFIFAFGGTILFMQILDRIKFKDAVFVPLIGIMYGNILSSITTFFAYEGDLI
QNINTWLMGSFTLVISGRYELLYVSVPAILLAYLYANKFTVAGMGEDFAKNLGLSYKAVLNLGLILVAVISTTVVLTVGV
IPYLGLIVPNIVSLYMGDNLRKTIPHTIMLGIVFLLICDIIGRVVVYPFEIPVNVTVAVIGSLLFLIMLFRGRAYAK

Nucleotide


Download         Length: 954 bp        

>NTDB_id=982601 NSS77_RS07390 WP_342471020.1 1502899..1503852(+) (ceuB) [Ureibacillus sp. FSL K6-3587]
ATGAGGCTATGGATGTTGATACTTACAGCAATCATCCTGTCGCTCGTTTCGCTGTTTATTGGCGCGATTGATATAAAACC
GACTGATTTATTGGACTGGGAATCCCAGCAAACGCAAATATTCCTGATCAGTAGGGTGCCAAGGCTGATGGCGATTATTT
TGGCAGGCGCAGGAATGAGTATTGCTGGTTTAATCATGCAAAGTTTAAGTCGCAATAAGTTCGTTTCACCAACTACAGCA
GGCACATTGGATGCAGCAAAATTGGGAATTCTCATTTCCATCTTGTTGTTTTCACAAGCAGCATATATGGAAAAAATTCT
TTTTAGCTTCATCTTTGCGTTCGGCGGTACCATTTTATTTATGCAAATTTTAGATCGCATCAAGTTTAAAGATGCCGTTT
TTGTTCCGCTGATCGGTATCATGTATGGAAATATTTTATCTTCCATTACAACTTTCTTTGCATATGAGGGAGACTTGATT
CAAAATATCAACACTTGGTTGATGGGCAGTTTTACATTGGTCATCTCCGGGCGGTATGAACTGCTGTATGTAAGTGTTCC
TGCCATCCTATTGGCTTATTTATATGCAAATAAATTTACGGTTGCCGGAATGGGCGAGGATTTTGCCAAAAACTTGGGGC
TCAGTTACAAAGCCGTATTGAATCTTGGTTTAATTCTTGTTGCCGTCATTTCAACGACAGTCGTATTGACGGTCGGTGTA
ATCCCTTACTTGGGGCTGATTGTTCCGAATATTGTGTCCCTTTATATGGGGGACAACTTGCGGAAAACGATTCCTCATAC
AATTATGTTAGGAATTGTGTTCCTGTTAATTTGCGACATTATTGGCCGGGTAGTGGTTTATCCTTTCGAAATTCCGGTCA
ATGTGACAGTCGCAGTAATAGGCAGTTTGCTCTTCTTAATCATGTTGTTTAGGGGGAGAGCATATGCGAAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.899

99.685

0.517

Multiple sequence alignment