Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   NSQ51_RS10825 Genome accession   NZ_CP151966
Coordinates   2047799..2049520 (-) Length   573 a.a.
NCBI ID   WP_033009423.1    Uniprot ID   Q75TG1
Organism   Geobacillus sp. FSL K6-0789     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2042799..2054520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ51_RS10795 (NSQ51_10795) - 2043380..2043643 (-) 264 WP_230581370.1 hypothetical protein -
  NSQ51_RS10800 (NSQ51_10800) - 2043818..2044066 (+) 249 WP_033009427.1 DUF2627 domain-containing protein -
  NSQ51_RS10805 (NSQ51_10805) - 2044125..2044853 (-) 729 WP_033009425.1 glycerophosphodiester phosphodiesterase -
  NSQ51_RS10810 (NSQ51_10810) - 2044964..2045116 (+) 153 WP_064502501.1 YycC family protein -
  NSQ51_RS10815 (NSQ51_10815) spo0A 2045245..2046024 (-) 780 WP_033016446.1 sporulation transcription factor Spo0A -
  NSQ51_RS10820 (NSQ51_10820) spoIVB 2046315..2047610 (-) 1296 WP_080986151.1 SpoIVB peptidase -
  NSQ51_RS10825 (NSQ51_10825) recN 2047799..2049520 (-) 1722 WP_033009423.1 DNA repair protein RecN Machinery gene
  NSQ51_RS10830 (NSQ51_10830) argR 2049662..2050111 (-) 450 WP_033016443.1 transcriptional regulator ArgR -
  NSQ51_RS10835 (NSQ51_10835) - 2050192..2051040 (-) 849 WP_033009419.1 TlyA family RNA methyltransferase -
  NSQ51_RS10840 (NSQ51_10840) dxs 2051045..2052937 (-) 1893 WP_049624620.1 1-deoxy-D-xylulose-5-phosphate synthase -
  NSQ51_RS10845 (NSQ51_10845) - 2053008..2053163 (+) 156 WP_155266802.1 hypothetical protein -
  NSQ51_RS10850 (NSQ51_10850) - 2053160..2054053 (-) 894 WP_049624621.1 polyprenyl synthetase family protein -
  NSQ51_RS10855 (NSQ51_10855) - 2054057..2054287 (-) 231 WP_049624622.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 573 a.a.        Molecular weight: 63949.42 Da        Isoelectric Point: 4.9166

>NTDB_id=982496 NSQ51_RS10825 WP_033009423.1 2047799..2049520(-) (recN) [Geobacillus sp. FSL K6-0789]
MLAELSIKNFAIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGGRGSSEFVRFGAEKAEIEGLFLLDDDRHPCCQK
CADIGVDVSDGMVVLRRDILASGKSICRINGKLVTTAVLRDIGSTLVDIHGQHEHQELMDPSRHLPLLDEFGGAETAAAL
ARYRALYEEREALVKKLKKLSENEQQMAHRLDLLTFQLREIEQAGLEIGEDERLMEEKVRIVNFQKIYQAIQHSYEALAG
EGRGLDSVGQAMGHLEDVAAMDAELKEAHEMVANSYYLLEEVMYRLRDQLEELEYDPMRLDAIESRLAEIQQLKRKYGAT
IADILQYAEAIAEEIETIENRDMHVHDLERQLADVTGKLLAEAKKVTSIRQAYARQLIERIQQELKDLYMEKTQFDIVFA
KREGPLDAPLVDGVPVKFAEDGIDVVEFYLSTNVGEPLKPLAKTASGGELSRIMLALKTIFSKHQGVTSIIFDEVDTGVS
GRVAQAIAEKIYRIASQSQVLCISHLPQVAAMADTHLLIVKETDGTRTKTAVKKLDEEEKVKEIGRMISGVEMTELTKQH
AKELLELAAKMKR

Nucleotide


Download         Length: 1722 bp        

>NTDB_id=982496 NSQ51_RS10825 WP_033009423.1 2047799..2049520(-) (recN) [Geobacillus sp. FSL K6-0789]
ATGCTCGCTGAACTGTCGATTAAAAATTTCGCGATTATCGAATCGCTCTCGTTGTCGTTTGATAAAGGGCTGACGGTGTT
GACGGGCGAAACAGGGGCCGGCAAGTCGATCATCATCGACGCCATTCATTTGCTCATCGGCGGGCGCGGTTCGTCTGAGT
TCGTCCGTTTCGGCGCAGAGAAGGCCGAAATCGAAGGGCTGTTTTTGCTTGATGACGACCGCCATCCATGCTGCCAAAAA
TGTGCGGACATTGGCGTTGATGTCAGCGATGGGATGGTGGTGCTCCGCCGCGACATTTTGGCGAGCGGCAAAAGCATCTG
CCGCATCAACGGCAAGCTCGTCACCACCGCCGTGCTGCGCGACATCGGTTCGACGCTCGTCGATATTCACGGTCAGCATG
AGCATCAAGAGCTGATGGATCCATCCCGCCATCTGCCGCTTCTCGATGAGTTTGGCGGCGCGGAAACGGCGGCAGCGCTG
GCGCGTTATCGCGCTCTGTATGAAGAGCGTGAAGCGTTGGTAAAAAAGTTGAAAAAGCTGAGTGAAAATGAGCAGCAAAT
GGCGCATCGGCTCGATTTGTTGACGTTTCAGCTGCGCGAAATCGAACAAGCCGGGCTCGAGATTGGCGAAGACGAGCGGC
TGATGGAAGAAAAAGTGCGGATTGTGAATTTCCAAAAAATTTATCAAGCCATTCAGCATAGCTACGAAGCGCTCGCCGGC
GAAGGACGCGGCTTGGATTCGGTCGGCCAGGCGATGGGCCATCTCGAGGACGTCGCTGCGATGGACGCGGAACTTAAAGA
GGCGCATGAAATGGTGGCCAACAGCTACTATTTGCTCGAGGAAGTCATGTATAGGCTGCGCGACCAACTTGAGGAGCTTG
AATACGACCCGATGCGGCTTGACGCCATTGAAAGCCGCCTCGCGGAAATCCAGCAATTAAAACGGAAGTACGGAGCGACG
ATCGCCGATATTTTGCAGTATGCCGAAGCGATCGCCGAAGAAATCGAGACGATTGAAAACCGCGACATGCATGTGCACGA
CCTCGAGCGGCAGCTTGCCGACGTGACCGGCAAATTGCTTGCCGAGGCGAAAAAGGTGACCAGCATCCGCCAGGCGTACG
CCCGGCAGCTGATTGAGCGCATTCAGCAAGAATTGAAAGATTTGTACATGGAAAAAACGCAGTTTGACATCGTCTTCGCC
AAACGCGAAGGTCCGCTCGACGCCCCGCTGGTCGACGGCGTGCCGGTCAAATTTGCGGAAGACGGCATCGATGTTGTCGA
ATTTTACCTGTCGACGAACGTCGGCGAGCCGCTGAAGCCGCTTGCCAAAACTGCTTCAGGCGGCGAGCTGTCGCGCATTA
TGCTCGCATTGAAGACGATTTTTTCGAAACACCAAGGCGTGACATCGATTATTTTTGATGAAGTCGACACCGGCGTCAGC
GGCCGGGTCGCCCAGGCGATCGCCGAAAAAATTTACCGCATCGCCAGCCAGTCGCAAGTGCTTTGCATTTCCCACCTGCC
GCAAGTCGCCGCCATGGCGGACACGCATCTGTTGATCGTGAAGGAAACGGACGGAACGCGGACCAAAACGGCCGTGAAAA
AGCTCGATGAGGAGGAGAAGGTGAAGGAAATCGGACGGATGATTTCCGGCGTGGAGATGACCGAACTGACGAAGCAGCAT
GCCAAAGAGCTGCTCGAGCTGGCGGCGAAAATGAAGCGATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-526)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q75TG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

61.847

100

0.62

Multiple sequence alignment