Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MHH70_RS13840 Genome accession   NZ_CP151964
Coordinates   2948730..2949686 (+) Length   318 a.a.
NCBI ID   WP_066169225.1    Uniprot ID   -
Organism   Metasolibacillus sp. FSL H7-0170     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2943730..2954686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH70_RS13825 (MHH70_13825) - 2944354..2945184 (+) 831 WP_342471776.1 MerR family transcriptional regulator -
  MHH70_RS13830 (MHH70_13830) - 2945738..2947225 (+) 1488 WP_342471777.1 peptide MFS transporter -
  MHH70_RS13835 (MHH70_13835) - 2947492..2948325 (+) 834 WP_342471778.1 GNAT family N-acetyltransferase -
  MHH70_RS13840 (MHH70_13840) ceuB 2948730..2949686 (+) 957 WP_066169225.1 ABC transporter permease Machinery gene
  MHH70_RS13845 (MHH70_13845) - 2949673..2950629 (+) 957 WP_066169223.1 iron chelate uptake ABC transporter family permease subunit -
  MHH70_RS13850 (MHH70_13850) - 2950626..2951393 (+) 768 WP_066169221.1 ABC transporter ATP-binding protein -
  MHH70_RS13855 (MHH70_13855) - 2951566..2952615 (+) 1050 WP_066169219.1 siderophore ABC transporter substrate-binding protein -
  MHH70_RS13860 (MHH70_13860) fumC 2952828..2954219 (-) 1392 WP_066169217.1 class II fumarate hydratase -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34710.97 Da        Isoelectric Point: 9.5449

>NTDB_id=982435 MHH70_RS13840 WP_066169225.1 2948730..2949686(+) (ceuB) [Metasolibacillus sp. FSL H7-0170]
MRLWMLVVATIILSFISLFIGAIDIKPSDLLDLDSDKAQIFLMSRVPRLMAIILAGAGMGISGLIMQSLSRNKFVSPTTS
GTLDAAKLGIVVSMVFFTSVGYMEKIIFSFAFALIGMMIFMRLLESIKFKDVIFVPLIGIMYGNIIGAISTFIAYEAEVL
QSVDTFFLGSFTLVVSGRYELLYVAVPAIILAYLYANKFTVAGMGEDFAKNLGLSYRTVLNLGLVIVAIISTTVVLTVGI
IPFLGLIVPNLVSLYLGDNLRKTIPHTIFLGAAFLLMCDILSRLIVYPFEIPVNTTVAVIGSAIFLVMLFRGKAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=982435 MHH70_RS13840 WP_066169225.1 2948730..2949686(+) (ceuB) [Metasolibacillus sp. FSL H7-0170]
ATGAGACTTTGGATGCTTGTAGTGGCAACCATCATCTTATCCTTTATATCACTATTTATCGGAGCTATCGACATTAAACC
GTCTGATTTATTAGATTTGGATTCAGATAAAGCACAAATTTTCTTAATGAGTCGAGTGCCACGATTAATGGCGATTATTC
TTGCAGGGGCAGGGATGGGGATTTCAGGTTTAATTATGCAAAGTTTAAGCCGTAATAAGTTCGTATCTCCGACGACATCG
GGGACGCTGGACGCCGCTAAGCTAGGCATAGTTGTATCGATGGTGTTTTTCACAAGTGTTGGCTATATGGAGAAAATTAT
CTTCAGCTTTGCATTCGCACTTATCGGCATGATGATTTTCATGCGACTGCTTGAAAGCATTAAATTTAAGGATGTAATTT
TTGTTCCGCTTATCGGAATTATGTACGGAAATATTATCGGAGCTATTTCAACATTTATTGCTTATGAGGCAGAAGTTCTG
CAAAGTGTGGATACATTTTTTTTAGGAAGCTTTACACTTGTCGTATCAGGTCGCTATGAATTACTTTATGTAGCTGTACC
AGCAATTATATTAGCTTATTTATATGCGAATAAATTCACTGTTGCTGGAATGGGCGAGGATTTCGCTAAAAACTTGGGAT
TAAGCTATCGCACTGTATTAAATTTAGGTTTAGTGATTGTAGCGATTATTTCAACAACAGTTGTACTCACAGTTGGGATT
ATTCCATTTCTAGGGTTAATCGTGCCTAATTTAGTTTCATTATATTTAGGAGACAATTTAAGAAAAACGATTCCCCATAC
GATTTTTTTAGGCGCTGCATTTTTATTAATGTGTGATATTTTAAGCCGTCTTATCGTCTATCCTTTCGAAATACCAGTCA
ATACAACGGTTGCAGTAATTGGCAGTGCAATCTTCTTAGTGATGTTGTTTAGGGGGAAAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

99.371

0.519

Multiple sequence alignment