Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MHH70_RS01375 Genome accession   NZ_CP151964
Coordinates   300367..302058 (+) Length   563 a.a.
NCBI ID   WP_342472324.1    Uniprot ID   -
Organism   Metasolibacillus sp. FSL H7-0170     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 295367..307058
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH70_RS01350 (MHH70_01350) xseB 295563..295790 (+) 228 WP_066162712.1 exodeoxyribonuclease VII small subunit -
  MHH70_RS01355 (MHH70_01355) - 295794..296669 (+) 876 WP_342473143.1 polyprenyl synthetase family protein -
  MHH70_RS01360 (MHH70_01360) dxs 297012..298913 (+) 1902 WP_066162715.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MHH70_RS01365 (MHH70_01365) - 298910..299734 (+) 825 WP_066162716.1 TlyA family RNA methyltransferase -
  MHH70_RS01370 (MHH70_01370) argR 299904..300353 (+) 450 WP_066162719.1 transcriptional regulator ArgR -
  MHH70_RS01375 (MHH70_01375) recN 300367..302058 (+) 1692 WP_342472324.1 DNA repair protein RecN Machinery gene
  MHH70_RS01380 (MHH70_01380) - 302336..303262 (+) 927 WP_066162724.1 SpoIVB peptidase S55 domain-containing protein -
  MHH70_RS01385 (MHH70_01385) spo0A 303579..304376 (+) 798 WP_066162726.1 sporulation transcription factor Spo0A -
  MHH70_RS01390 (MHH70_01390) - 304856..306427 (+) 1572 WP_107942832.1 FapA family protein -

Sequence

Protein


Download         Length: 563 a.a.        Molecular weight: 63700.41 Da        Isoelectric Point: 4.7248

>NTDB_id=982411 MHH70_RS01375 WP_342472324.1 300367..302058(+) (recN) [Metasolibacillus sp. FSL H7-0170]
MLRELSIRNFAIIDDLTVSFADGLTVLTGETGAGKSIIIDAVHLLAGGRGSHEFIRHGARKAELGGLFHIMDDHHPVFAK
LDEAGIEYEDGTIILRRDINDNGKSVCRINGKLVPTNVLREIGGSLIDIHGQHENQELMDEKQHINLLDHFAYEELSSFL
AAYNEKYEAYRSLKREVAELSLDEQRMAQRIDLYQFQMNELEEAALKLREEDALMEERLRLMNFHKIFERASIAYEAISG
EQHGLDYIGNAMSALEDIVSLDEHFKEATEAVTTSFYALQDASYQIKNVLDELEFDAGRLNEVEQRLAQYQTMKRKYGTT
VEEILAYYDKIAAELMQLMNRDETIQKNELRLSQMEEELTQLASTLTEIRKKQALLLSEAIMEQLRVLHMEKAEFIVKFE
SLEGFDAYGKDYVAFYIATNVGEPPKSLPKIASGGELSRMMLALKTIFSSTNGITSIIFDEVDTGVSGRVAQAIAEKIAA
ISIHSQVLCISHLPQVAAMADQHYLIKKQVEHDRTFTTVTEIKERARIEEVSRMMSGAEITDLTLQHAQELVEIADARKQ
AMQ

Nucleotide


Download         Length: 1692 bp        

>NTDB_id=982411 MHH70_RS01375 WP_342472324.1 300367..302058(+) (recN) [Metasolibacillus sp. FSL H7-0170]
TTGTTAAGAGAGCTAAGTATTCGAAACTTTGCGATTATAGATGATTTAACAGTGAGCTTTGCGGATGGGTTAACGGTTTT
AACTGGTGAAACGGGTGCAGGAAAGTCCATTATCATTGATGCTGTTCATTTGCTAGCCGGTGGGCGTGGTTCCCATGAAT
TTATTCGCCACGGTGCTAGAAAAGCGGAGCTAGGTGGCTTATTTCATATCATGGATGACCATCACCCTGTCTTTGCAAAA
TTAGACGAAGCCGGAATTGAATATGAGGACGGCACAATTATTTTGCGTCGTGATATTAATGATAATGGCAAAAGCGTTTG
TCGCATCAATGGCAAGCTTGTACCAACTAACGTGTTACGGGAGATTGGTGGTAGCCTTATTGATATACATGGCCAGCATG
AAAATCAAGAATTAATGGATGAAAAGCAGCATATCAACTTACTGGATCATTTCGCTTATGAAGAGCTTTCGTCATTTTTA
GCGGCATATAATGAGAAGTATGAGGCTTACCGTAGCTTAAAGCGTGAAGTGGCTGAGCTTAGTTTAGATGAGCAAAGAAT
GGCACAGCGCATTGATTTATATCAATTTCAAATGAATGAGCTAGAGGAAGCTGCATTAAAGCTCAGGGAAGAAGATGCGC
TAATGGAGGAACGTTTGCGATTAATGAACTTCCATAAAATCTTTGAACGTGCAAGTATTGCCTATGAGGCGATTTCTGGA
GAGCAGCATGGCTTAGATTATATAGGGAATGCGATGTCAGCGCTGGAGGATATCGTTTCATTAGATGAGCATTTTAAAGA
GGCTACTGAGGCAGTGACAACGAGCTTTTATGCATTGCAGGATGCAAGCTATCAAATTAAAAATGTGCTGGACGAATTGG
AATTTGATGCGGGACGTTTAAACGAAGTTGAGCAACGTTTAGCGCAATATCAAACAATGAAGCGCAAATATGGTACAACC
GTTGAAGAAATTTTAGCATATTATGATAAAATAGCGGCTGAGCTAATGCAATTGATGAATCGCGATGAAACAATACAAAA
AAATGAATTGCGCTTAAGTCAAATGGAGGAAGAACTTACACAGCTAGCCTCCACATTAACTGAAATACGTAAAAAGCAAG
CTTTATTACTAAGTGAAGCAATTATGGAACAGTTGCGTGTATTACATATGGAAAAGGCAGAGTTTATTGTCAAATTCGAA
TCCCTTGAAGGATTTGATGCATATGGTAAGGATTATGTGGCATTTTACATTGCGACAAATGTTGGTGAACCACCTAAATC
ATTACCGAAAATTGCATCTGGTGGTGAATTGTCACGTATGATGCTTGCATTAAAGACTATTTTCTCCTCAACAAATGGTA
TTACATCCATTATTTTTGATGAGGTAGATACAGGTGTCAGTGGGCGTGTTGCGCAAGCAATTGCTGAAAAAATCGCAGCG
ATTTCCATCCATTCACAGGTGCTCTGCATTTCTCATTTACCGCAAGTGGCTGCGATGGCAGATCAGCATTATTTAATTAA
AAAGCAAGTAGAGCATGACAGAACATTTACTACGGTTACAGAAATTAAAGAGCGTGCACGCATTGAGGAAGTAAGTCGTA
TGATGAGCGGTGCAGAAATTACCGATTTAACATTGCAGCATGCTCAAGAGCTTGTAGAAATAGCGGACGCAAGAAAACAG
GCAATGCAATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-509)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

52.265

100

0.533

Multiple sequence alignment