Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   MHH57_RS12045 Genome accession   NZ_CP151963
Coordinates   2703239..2705002 (+) Length   587 a.a.
NCBI ID   WP_039275165.1    Uniprot ID   A0A8I1J570
Organism   Paenibacillus sp. FSL H7-0442     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2698239..2710002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH57_RS12020 (MHH57_12020) - 2698348..2698452 (+) 105 WP_023988604.1 DUF6254 family protein -
  MHH57_RS12025 (MHH57_12025) dapA 2698910..2699791 (-) 882 WP_165150627.1 4-hydroxy-tetrahydrodipicolinate synthase -
  MHH57_RS12030 (MHH57_12030) - 2699906..2700778 (+) 873 WP_069011343.1 LysR family transcriptional regulator -
  MHH57_RS12035 (MHH57_12035) - 2701158..2702180 (+) 1023 WP_342435119.1 NADH:flavin oxidoreductase/NADH oxidase -
  MHH57_RS12040 (MHH57_12040) - 2702755..2703165 (+) 411 WP_069011340.1 MarR family transcriptional regulator -
  MHH57_RS12045 (MHH57_12045) rcrP 2703239..2705002 (+) 1764 WP_039275165.1 ABC transporter ATP-binding protein Regulator
  MHH57_RS12050 (MHH57_12050) rcrQ 2704995..2706845 (+) 1851 WP_342435120.1 ABC transporter ATP-binding protein Regulator
  MHH57_RS12055 (MHH57_12055) - 2706967..2707275 (+) 309 WP_342435121.1 hypothetical protein -

Sequence


Protein


Download         Length: 587 a.a.        Molecular weight: 64743.03 Da        Isoelectric Point: 8.1896

>NTDB_id=982388 MHH57_RS12045 WP_039275165.1 2703239..2705002(+) (rcrP) [Paenibacillus sp. FSL H7-0442]
MLKIFKYLKKNEWMLVLCSLAFIVVQVWLDLKLPDYMAEITTKLQTEGTPMSELLIPGSYMLFCAVGSMIASIIVGYFAA
KVAAGLAMRLRAMVFDKALSFSMEEMNNFSTASLITRSTNDVTQIQTVVALGLQVIIKAPILAVWAIAKIADKNWQWTAS
TGVAVAVLILMLSVIVIFALPSFQKIQRLTDNLNRVTREHLTGLRVVRAYNADQYQEEKFGQANAELTNTNLFANRLMAM
VGPGMTFIMSGLSVSIYWVGTYLINGAAVPDRITLFSNMVVFSSYAVQVVMAFMMVSMIFFLMPRASISAKRIMEVLNTE
SSIVNGHETTGEESVMGQVEFRNVSFKYPDAEEAVLRNISFTAKRGETVAFIGATGSGKTSVINLIPRFYDVTEGEVLVD
GVNVRNYNQQALHNKIGYVPQRAVLFNGTVVSNVSYGVNGRAGASEKLVKEAVGIAQGTEFVEKMDGQYQGRISQGGANV
SGGQKQRLSIARAIYRQPEIYIFDDSFSALDYRTDRILRSALKKETGHATTLIVGQRIGTIKDADRIIVLDQGEIVGSGT
HEELMTNCSTYQEIAYSQLSKEELIHG

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=982388 MHH57_RS12045 WP_039275165.1 2703239..2705002(+) (rcrP) [Paenibacillus sp. FSL H7-0442]
ATGCTAAAGATATTCAAATATCTCAAAAAAAATGAATGGATGCTCGTGCTTTGCAGCCTGGCTTTCATCGTTGTGCAGGT
ATGGCTTGATCTGAAGCTACCTGATTATATGGCGGAAATTACGACCAAGCTGCAAACAGAAGGAACACCTATGTCCGAAC
TGCTGATTCCCGGCAGTTACATGTTGTTTTGTGCCGTCGGCAGTATGATTGCATCTATTATTGTCGGCTATTTTGCGGCA
AAGGTCGCGGCAGGGCTGGCCATGCGTCTGCGTGCGATGGTCTTTGACAAGGCCTTATCTTTTTCCATGGAAGAGATGAA
CAACTTTTCAACAGCCAGCCTTATCACCCGCTCCACGAACGATGTTACCCAAATTCAAACGGTGGTTGCGCTGGGGCTGC
AGGTGATCATCAAGGCGCCGATTCTGGCCGTGTGGGCCATTGCAAAAATTGCGGATAAAAACTGGCAGTGGACCGCCTCT
ACAGGAGTGGCTGTGGCTGTCCTGATCCTGATGCTGAGTGTCATTGTTATTTTCGCTCTTCCGAGTTTCCAAAAAATCCA
ACGTCTCACCGATAATCTGAACAGAGTAACACGTGAGCATCTGACCGGGCTTCGGGTGGTGCGCGCTTATAATGCAGATC
AGTATCAGGAGGAGAAGTTCGGGCAGGCTAATGCCGAATTGACGAATACAAACCTGTTTGCGAACCGGTTAATGGCAATG
GTTGGCCCGGGTATGACCTTTATTATGTCGGGTCTGAGTGTCTCGATCTATTGGGTTGGCACTTACCTGATTAACGGAGC
GGCCGTGCCGGACCGCATTACGCTATTCTCTAATATGGTCGTATTCTCCTCTTATGCGGTGCAGGTGGTCATGGCCTTTA
TGATGGTAAGTATGATTTTCTTCCTGATGCCTCGAGCTTCGATTTCTGCCAAACGGATCATGGAGGTTTTGAATACCGAA
TCCAGTATCGTTAACGGGCATGAGACGACTGGAGAAGAAAGCGTTATGGGGCAAGTGGAATTCCGTAATGTCAGCTTCAA
ATATCCGGACGCGGAGGAGGCCGTGCTTCGCAATATTAGCTTTACGGCGAAACGAGGCGAGACGGTTGCCTTTATTGGCG
CTACAGGCAGCGGCAAAACCAGCGTGATCAATCTAATTCCCCGCTTCTATGATGTGACCGAGGGAGAGGTACTCGTGGAC
GGTGTGAATGTCAGGAACTATAATCAGCAGGCACTCCATAACAAAATCGGATATGTTCCCCAGAGAGCTGTACTGTTCAA
CGGTACGGTGGTATCCAACGTTTCGTATGGTGTTAACGGAAGAGCAGGAGCTTCAGAGAAACTCGTCAAAGAAGCCGTTG
GTATTGCTCAAGGAACGGAGTTTGTTGAAAAAATGGATGGTCAGTATCAGGGTAGAATTTCGCAAGGTGGAGCGAACGTG
TCCGGTGGTCAAAAGCAACGGCTGTCGATTGCGCGTGCCATCTACCGACAGCCGGAAATTTATATTTTCGATGATTCCTT
CTCGGCACTAGATTACAGAACAGATCGGATTCTGCGCTCCGCTCTCAAAAAAGAAACCGGCCACGCTACGACACTTATTG
TTGGTCAGCGCATAGGCACTATCAAAGACGCTGACCGAATTATCGTGCTGGACCAGGGGGAGATTGTAGGGAGTGGCACG
CATGAAGAGCTGATGACGAACTGCAGCACCTATCAGGAGATCGCATATTCGCAGCTTTCGAAGGAGGAACTCATACATGG
ATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.254

100

0.533


Multiple sequence alignment