Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NYE49_RS07785 Genome accession   NZ_CP151962
Coordinates   1484850..1485425 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0358     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1479850..1490425
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE49_RS07755 (NYE49_07755) dapD 1480037..1480747 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NYE49_RS07760 (NYE49_07760) - 1480817..1481941 (+) 1125 WP_047182548.1 N-acetyldiaminopimelate deacetylase -
  NYE49_RS07765 (NYE49_07765) - 1482003..1482248 (+) 246 WP_003232382.1 YkuS family protein -
  NYE49_RS07770 (NYE49_07770) mscT 1482285..1483088 (-) 804 WP_041517839.1 small-conductance mechanosensitive channel protein MscT -
  NYE49_RS07775 (NYE49_07775) ahpA 1483325..1483867 (+) 543 WP_047182549.1 biofilm-specific peroxidase AhpA -
  NYE49_RS07780 (NYE49_07780) ykuV 1483938..1484384 (+) 447 WP_047182550.1 thiol-disulfide oxidoreductase YkuV -
  NYE49_RS07785 (NYE49_07785) rok 1484850..1485425 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  NYE49_RS07790 (NYE49_07790) cse15 1485466..1486431 (-) 966 WP_047182551.1 spore protein Cse15 -
  NYE49_RS07795 (NYE49_07795) - 1486568..1487167 (+) 600 WP_047182552.1 molybdenum cofactor guanylyltransferase -
  NYE49_RS07800 (NYE49_07800) - 1487218..1488237 (+) 1020 WP_342410986.1 molybdopterin-synthase adenylyltransferase MoeB -
  NYE49_RS07805 (NYE49_07805) glp 1488255..1489547 (+) 1293 WP_015383547.1 gephyrin-like molybdotransferase Glp -
  NYE49_RS07810 (NYE49_07810) mobB 1489508..1490029 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=982327 NYE49_RS07785 WP_003232378.1 1484850..1485425(+) (rok) [Bacillus sp. FSL L8-0358]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=982327 NYE49_RS07785 WP_003232378.1 1484850..1485425(+) (rok) [Bacillus sp. FSL L8-0358]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACTACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment