Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NYE49_RS07685 Genome accession   NZ_CP151962
Coordinates   1468970..1469434 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus sp. FSL L8-0358     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1463970..1474434
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE49_RS07665 (NYE49_07665) kinA 1464437..1466257 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  NYE49_RS07670 (NYE49_07670) - 1466267..1467448 (-) 1182 WP_123373508.1 aminotransferase A -
  NYE49_RS07675 (NYE49_07675) - 1467650..1467811 (-) 162 WP_003245246.1 hypothetical protein -
  NYE49_RS07680 (NYE49_07680) cheV 1468015..1468926 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  NYE49_RS07685 (NYE49_07685) kre 1468970..1469434 (-) 465 WP_003232406.1 YkyB family protein Regulator
  NYE49_RS07690 (NYE49_07690) - 1469560..1470852 (-) 1293 WP_014479656.1 MFS transporter -
  NYE49_RS07695 (NYE49_07695) - 1470928..1471422 (-) 495 WP_123373645.1 L,D-transpeptidase family protein -
  NYE49_RS07700 (NYE49_07700) - 1471478..1472338 (-) 861 WP_047182545.1 metallophosphoesterase -
  NYE49_RS07705 (NYE49_07705) fadH 1472481..1473245 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=982326 NYE49_RS07685 WP_003232406.1 1468970..1469434(-) (kre) [Bacillus sp. FSL L8-0358]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=982326 NYE49_RS07685 WP_003232406.1 1468970..1469434(-) (kre) [Bacillus sp. FSL L8-0358]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAACCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment