Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MHI30_RS06405 Genome accession   NZ_CP151961
Coordinates   1280020..1281849 (+) Length   609 a.a.
NCBI ID   WP_305954531.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0528     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1275020..1286849
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI30_RS06390 (MHI30_06390) - 1276202..1276921 (-) 720 WP_075753406.1 response regulator -
  MHI30_RS06395 (MHI30_06395) - 1276944..1278488 (-) 1545 WP_154495634.1 sensor histidine kinase -
  MHI30_RS06400 (MHI30_06400) - 1278659..1279807 (+) 1149 WP_075753402.1 competence protein CoiA family protein -
  MHI30_RS06405 (MHI30_06405) pepF 1280020..1281849 (+) 1830 WP_305954531.1 oligoendopeptidase F Regulator
  MHI30_RS06410 (MHI30_06410) - 1281906..1282073 (-) 168 WP_009328823.1 hypothetical protein -
  MHI30_RS06415 (MHI30_06415) spxH 1282485..1283387 (-) 903 WP_009328822.1 protease adaptor protein SpxH -
  MHI30_RS06420 (MHI30_06420) - 1283384..1283782 (-) 399 WP_003180652.1 thiol management oxidoreductase -
  MHI30_RS06425 (MHI30_06425) - 1284064..1284717 (-) 654 WP_009328821.1 lytic transglycosylase domain-containing protein -
  MHI30_RS06430 (MHI30_06430) - 1284730..1285302 (-) 573 WP_009328820.1 CYTH domain-containing protein -
  MHI30_RS06435 (MHI30_06435) - 1285433..1285798 (+) 366 WP_009328819.1 hypothetical protein -
  MHI30_RS06440 (MHI30_06440) - 1285830..1286465 (+) 636 WP_009328818.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 609 a.a.        Molecular weight: 70382.99 Da        Isoelectric Point: 4.8580

>NTDB_id=982247 MHI30_RS06405 WP_305954531.1 1280020..1281849(+) (pepF) [Bacillus sp. FSL L8-0528]
MAEEKKSKKLPSREEVKQEDTWRLEDIFPSDDAWNEEFQAVKELLPKLSEFKGRLGHSADELYEALTYQDKVMERLGKLY
TYAHMRYDQDTGNSFYQGLNDKAANLYTQAASATAYMVPEILSIQEEKLQQFLLEKEELKLYSHALEEINKERPHVLSEE
EEGILAEASDVLSASSNTFGMLNNADMEFPEITDENGEKVQLTHGNYVTFLESENRDVRRAAFKAVYETYGRFKNTLAST
LSGAVKKDNFYAKVKHYKSAREAALSRNSIPEEVYDNLVSTINKHLPLLHRYVEIRKKVLELDEVHMYDLYTPLVKDSGM
KVTYEQAKDYMLKGLAPLGEEYSSILKEGLNNRWVDVYENKGKRSGAYSSGTYGTNPYILMNWQDNVNNLFTLVHEFGHS
VHSYYTRKYQPYPYGNYSIFVAEVASTTNEALLGEYLLNTIEDEKQRLYILNHMLEGFKGTVFRQTMFAEFEHEIHVKAQ
EGEPLTPELLTSIYYDLNKKYFGDNIEIDKEIGLEWSRIPHFYYNYYVYQYATGFSAAQALSQQILKEGKSAVDRYIEFL
KAGSSDYPIEVLKKAGVDMTSSEPIEAACKKFEEQLNEMEELLQKVNHS

Nucleotide


Download         Length: 1830 bp        

>NTDB_id=982247 MHI30_RS06405 WP_305954531.1 1280020..1281849(+) (pepF) [Bacillus sp. FSL L8-0528]
GTGGCTGAAGAAAAAAAATCGAAGAAACTGCCTTCAAGAGAAGAGGTGAAGCAAGAAGACACGTGGAGACTTGAGGATAT
CTTCCCGTCAGATGACGCTTGGAACGAGGAATTTCAAGCCGTTAAAGAACTGCTGCCCAAGCTTTCCGAATTCAAGGGCA
GGCTCGGCCATTCCGCCGATGAATTATATGAAGCGCTGACTTATCAGGATAAGGTGATGGAGCGTCTCGGGAAGCTGTAT
ACGTACGCTCACATGCGCTATGATCAGGATACTGGAAATTCTTTTTACCAAGGTCTCAATGATAAAGCGGCCAACCTCTA
TACCCAGGCTGCGAGCGCGACGGCCTACATGGTGCCGGAAATACTATCGATTCAGGAAGAAAAGCTTCAGCAGTTCCTGC
TGGAAAAAGAGGAGTTAAAGCTTTACTCGCATGCTCTCGAAGAAATCAATAAAGAGCGTCCTCACGTCCTGAGCGAGGAG
GAGGAAGGGATTTTGGCCGAAGCGTCTGATGTTCTTTCAGCTTCTTCCAATACGTTCGGCATGCTGAATAACGCCGATAT
GGAATTTCCGGAGATCACCGATGAAAATGGAGAAAAGGTGCAGCTCACACACGGCAATTATGTCACCTTTTTGGAAAGCG
AGAACCGTGATGTCCGCCGCGCGGCATTCAAGGCGGTTTACGAAACATACGGCCGCTTTAAAAACACGCTCGCTTCCACG
CTCAGCGGAGCTGTGAAAAAAGACAACTTTTATGCGAAGGTTAAACATTATAAATCGGCGCGGGAAGCTGCCTTGTCGCG
CAACAGCATTCCTGAAGAAGTCTACGACAATCTTGTCAGCACGATCAACAAGCATCTCCCGCTTCTTCACCGCTATGTTG
AGATTAGAAAAAAAGTGCTTGAGCTTGATGAAGTGCACATGTATGACCTGTATACCCCTCTGGTCAAGGATTCTGGAATG
AAAGTCACTTACGAGCAGGCAAAGGACTATATGCTGAAGGGTCTGGCGCCTTTGGGGGAAGAATATTCATCCATCCTGAA
AGAAGGATTGAACAACCGCTGGGTCGATGTGTATGAAAACAAAGGAAAACGAAGCGGCGCCTATTCTTCAGGAACTTACG
GAACCAATCCGTATATTTTGATGAACTGGCAGGACAACGTCAACAATCTGTTTACGCTCGTCCATGAATTCGGCCATTCC
GTGCACAGCTACTATACGAGAAAATATCAGCCTTACCCGTACGGTAACTACAGCATTTTCGTAGCCGAAGTTGCTTCTAC
GACGAATGAAGCGCTGTTGGGAGAATACCTGCTGAATACAATCGAAGATGAAAAACAGCGGCTCTATATTTTGAATCATA
TGCTCGAAGGCTTTAAAGGAACGGTTTTCAGACAGACGATGTTTGCCGAATTTGAACATGAGATCCATGTCAAAGCCCAG
GAAGGGGAACCGCTGACACCTGAGCTGTTAACGAGCATATACTATGATTTGAATAAGAAATATTTCGGAGACAATATTGA
GATTGATAAGGAAATCGGTCTTGAGTGGTCAAGAATTCCGCATTTCTATTACAATTATTATGTATATCAGTATGCGACAG
GCTTCAGTGCAGCTCAGGCGCTCAGCCAGCAGATTTTAAAAGAAGGCAAATCGGCTGTTGACCGCTATATTGAGTTCTTG
AAAGCTGGAAGCTCGGATTATCCGATTGAAGTGCTGAAAAAAGCCGGCGTCGATATGACGTCTTCAGAGCCGATCGAAGC
TGCGTGCAAAAAGTTTGAAGAGCAGCTGAATGAAATGGAAGAACTCCTGCAAAAAGTCAATCATTCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(210-589)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.419

98.03

0.494

Multiple sequence alignment