Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   MHI30_RS05720 Genome accession   NZ_CP151961
Coordinates   1134682..1135260 (+) Length   192 a.a.
NCBI ID   WP_026579946.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0528     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1129682..1140260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI30_RS05700 (MHI30_05700) - 1130181..1131473 (-) 1293 WP_075754850.1 globin-coupled sensor protein -
  MHI30_RS05705 (MHI30_05705) - 1131580..1133109 (-) 1530 WP_081379947.1 FAD-dependent oxidoreductase -
  MHI30_RS05710 (MHI30_05710) - 1133251..1134108 (+) 858 WP_075754854.1 SDR family oxidoreductase -
  MHI30_RS05715 (MHI30_05715) - 1134176..1134409 (-) 234 WP_020450828.1 IDEAL domain-containing protein -
  MHI30_RS05720 (MHI30_05720) comK 1134682..1135260 (+) 579 WP_026579946.1 competence protein ComK Regulator
  MHI30_RS05725 (MHI30_05725) - 1135254..1135619 (-) 366 WP_075754856.1 hypothetical protein -
  MHI30_RS05730 (MHI30_05730) - 1135827..1136438 (+) 612 WP_043927307.1 TVP38/TMEM64 family protein -
  MHI30_RS05735 (MHI30_05735) lepB 1136451..1136969 (+) 519 WP_075754858.1 signal peptidase I -
  MHI30_RS05740 (MHI30_05740) - 1137113..1138888 (-) 1776 WP_075754862.1 S8 family peptidase -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22420.64 Da        Isoelectric Point: 8.6274

>NTDB_id=982238 MHI30_RS05720 WP_026579946.1 1134682..1135260(+) (comK) [Bacillus sp. FSL L8-0528]
MSTEDMTKDTYEVNSSTMAVLPLGEGEKPASKILETDRTFRVNMKPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPPI
MVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFCAAKYDNTFVTFVNGETLELPVSITSFENQVYRTAWLRTKFIDRIEGN
AMQKKQEFMLYPKEDRNQLIYEFILRELKKRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=982238 MHI30_RS05720 WP_026579946.1 1134682..1135260(+) (comK) [Bacillus sp. FSL L8-0528]
ATGAGCACAGAGGATATGACAAAAGATACGTATGAAGTAAACAGTTCGACAATGGCTGTCCTGCCTCTGGGAGAGGGGGA
GAAACCCGCCTCAAAAATACTCGAGACCGACAGGACTTTCCGCGTCAATATGAAGCCGTTTCAGATCATCGAAAGAAGCT
GCCGCTATTTCGGATCGAGCTATGCGGGGAGAAAAGCGGGCACATATGAAGTCATTAAAGTTTCCCATAAACCGCCGATC
ATGGTGGATCACTCAAACAATATTTTTCTTTTTCCCACATTTTCCTCAACTCGTCCTCAGTGCGGGTGGCTTTCCCATGC
GCATGTTCACGAGTTTTGCGCGGCAAAGTATGACAACACGTTTGTCACGTTTGTCAACGGTGAAACGCTGGAGCTGCCCG
TATCCATCACATCTTTTGAAAACCAGGTTTACCGAACGGCATGGCTGAGAACAAAATTTATCGACCGGATTGAAGGAAAC
GCCATGCAGAAGAAACAGGAATTTATGCTCTATCCGAAGGAAGACCGGAATCAGCTGATATACGAATTCATCCTCAGGGA
GCTGAAAAAGCGCTATTGA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(9-157)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

68.617

97.917

0.672

Multiple sequence alignment