Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   MKY36_RS20210 Genome accession   NZ_CP151959
Coordinates   3807827..3808984 (-) Length   385 a.a.
NCBI ID   WP_003185733.1    Uniprot ID   -
Organism   Bacillus sp. FSL P2-0026     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3802827..3813984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY36_RS20180 (MKY36_20180) - 3803071..3803490 (-) 420 WP_003185715.1 TIGR03826 family flagellar region protein -
  MKY36_RS20185 (MKY36_20185) comFC 3803549..3804283 (-) 735 WP_011198352.1 amidophosphoribosyltransferase Machinery gene
  MKY36_RS20190 (MKY36_20190) - 3804240..3804524 (-) 285 WP_003185718.1 competence protein ComFB -
  MKY36_RS20195 (MKY36_20195) comFA 3804579..3805973 (-) 1395 WP_003185720.1 DEAD/DEAH box helicase Machinery gene
  MKY36_RS20200 (MKY36_20200) - 3806094..3806936 (-) 843 WP_003185726.1 DegV family protein -
  MKY36_RS20205 (MKY36_20205) degU 3807056..3807745 (-) 690 WP_003185730.1 two-component system response regulator DegU Regulator
  MKY36_RS20210 (MKY36_20210) degS 3807827..3808984 (-) 1158 WP_003185733.1 histidine kinase Regulator
  MKY36_RS20215 (MKY36_20215) - 3809198..3809836 (+) 639 WP_003185736.1 YigZ family protein -
  MKY36_RS20220 (MKY36_20220) - 3809851..3810924 (+) 1074 WP_017473894.1 LCP family protein -
  MKY36_RS20225 (MKY36_20225) - 3811009..3811383 (-) 375 WP_003185738.1 hypothetical protein -
  MKY36_RS20230 (MKY36_20230) - 3811503..3812567 (-) 1065 WP_003185739.1 MraY family glycosyltransferase -
  MKY36_RS20235 (MKY36_20235) - 3812698..3813879 (-) 1182 WP_011198354.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44636.36 Da        Isoelectric Point: 6.7863

>NTDB_id=982183 MKY36_RS20210 WP_003185733.1 3807827..3808984(-) (degS) [Bacillus sp. FSL P2-0026]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=982183 MKY36_RS20210 WP_003185733.1 3807827..3808984(-) (degS) [Bacillus sp. FSL P2-0026]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

89.351

100

0.894


Multiple sequence alignment