Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK   Type   Regulator
Locus tag   MKY36_RS05695 Genome accession   NZ_CP151959
Coordinates   1124351..1124929 (+) Length   192 a.a.
NCBI ID   WP_003180354.1    Uniprot ID   A0A1Y0YMJ8
Organism   Bacillus sp. FSL P2-0026     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1119351..1129929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY36_RS05675 (MKY36_05675) - 1119853..1121145 (-) 1293 WP_003180349.1 globin-coupled sensor protein -
  MKY36_RS05680 (MKY36_05680) - 1121252..1122781 (-) 1530 WP_003180351.1 FAD-dependent oxidoreductase -
  MKY36_RS05685 (MKY36_05685) - 1122922..1123779 (+) 858 WP_003180352.1 SDR family oxidoreductase -
  MKY36_RS05690 (MKY36_05690) - 1123845..1124078 (-) 234 WP_003180353.1 IDEAL domain-containing protein -
  MKY36_RS05695 (MKY36_05695) comK 1124351..1124929 (+) 579 WP_003180354.1 competence protein ComK Regulator
  MKY36_RS05700 (MKY36_05700) - 1124923..1125288 (-) 366 WP_003180357.1 hypothetical protein -
  MKY36_RS05705 (MKY36_05705) - 1125497..1126108 (+) 612 WP_003180359.1 TVP38/TMEM64 family protein -
  MKY36_RS05710 (MKY36_05710) lepB 1126121..1126639 (+) 519 WP_003180360.1 signal peptidase I -
  MKY36_RS05715 (MKY36_05715) - 1126794..1128569 (-) 1776 WP_003180361.1 S8 family peptidase -

Sequence


Protein


Download         Length: 192 a.a.        Molecular weight: 22432.65 Da        Isoelectric Point: 8.6274

>NTDB_id=982132 MKY36_RS05695 WP_003180354.1 1124351..1124929(+) (comK) [Bacillus sp. FSL P2-0026]
MSTEDMTKDTYEVNSSTMAVLPLGEGEKPASKILETDRTFRVNMKPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPPI
MVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFCAAKYDNTFVTFVNGETLELPVSISSFENQVYRTAWLRTKFIDRIEGN
PMQKKQEFMLYPKEDRNQLIYEFILRELKKRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=982132 MKY36_RS05695 WP_003180354.1 1124351..1124929(+) (comK) [Bacillus sp. FSL P2-0026]
ATGAGCACAGAGGATATGACAAAGGATACGTATGAAGTAAACAGTTCGACAATGGCTGTCCTGCCTCTGGGAGAGGGGGA
GAAACCCGCCTCAAAAATACTTGAGACCGACAGGACTTTCCGCGTCAATATGAAGCCGTTTCAAATTATCGAAAGAAGCT
GCCGCTATTTCGGATCGAGCTATGCGGGAAGAAAAGCGGGCACATATGAAGTCATTAAAGTTTCCCATAAACCGCCGATC
ATGGTGGATCACTCAAACAACATTTTTCTTTTCCCCACATTTTCCTCAACTCGTCCTCAGTGCGGGTGGCTTTCCCATGC
GCATGTTCACGAGTTTTGCGCGGCAAAGTATGACAACACGTTTGTCACGTTTGTCAACGGGGAAACGCTGGAGCTGCCCG
TATCCATCTCATCTTTCGAAAACCAGGTTTACCGAACGGCATGGCTGAGAACAAAATTTATCGACAGGATTGAAGGAAAC
CCCATGCAGAAGAAACAGGAATTTATGCTCTATCCGAAAGAAGACCGGAATCAGCTGATATACGAATTCATCCTCAGGGA
GCTGAAAAAGCGCTATTGA

Domains


Predicted by InterproScan.

(9-157)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1Y0YMJ8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

68.617

97.917

0.672


Multiple sequence alignment