Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | NST40_RS06135 | Genome accession | NZ_CP151956 |
| Coordinates | 1392264..1393211 (+) | Length | 315 a.a. |
| NCBI ID | WP_036681839.1 | Uniprot ID | A0A1R0X0A0 |
| Organism | Paenibacillus sp. FSL R10-2778 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1387264..1398211
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST40_RS06105 (NST40_06105) | - | 1387580..1388545 (+) | 966 | WP_076142180.1 | nitronate monooxygenase family protein | - |
| NST40_RS06110 (NST40_06110) | - | 1388630..1389724 (-) | 1095 | WP_342410519.1 | Xaa-Pro peptidase family protein | - |
| NST40_RS06115 (NST40_06115) | - | 1389950..1390792 (+) | 843 | WP_076185723.1 | SDR family oxidoreductase | - |
| NST40_RS06120 (NST40_06120) | - | 1390818..1391321 (+) | 504 | WP_342410521.1 | N-acetyltransferase family protein | - |
| NST40_RS06125 (NST40_06125) | - | 1391339..1391683 (-) | 345 | WP_076128100.1 | helix-turn-helix domain-containing protein | - |
| NST40_RS06130 (NST40_06130) | - | 1391775..1392035 (+) | 261 | WP_036681837.1 | YqkE family protein | - |
| NST40_RS06135 (NST40_06135) | ceuB | 1392264..1393211 (+) | 948 | WP_036681839.1 | ABC transporter permease | Machinery gene |
| NST40_RS06140 (NST40_06140) | - | 1393214..1394158 (+) | 945 | WP_036681842.1 | iron chelate uptake ABC transporter family permease subunit | - |
| NST40_RS06145 (NST40_06145) | - | 1394152..1394907 (+) | 756 | WP_342410523.1 | ABC transporter ATP-binding protein | - |
| NST40_RS06150 (NST40_06150) | - | 1395030..1396034 (+) | 1005 | WP_282579687.1 | siderophore ABC transporter substrate-binding protein | - |
| NST40_RS06155 (NST40_06155) | - | 1396203..1396706 (+) | 504 | WP_036681849.1 | sigma-70 family RNA polymerase sigma factor | - |
| NST40_RS06160 (NST40_06160) | - | 1396699..1397892 (+) | 1194 | WP_076220004.1 | anti-sigma factor | - |
Sequence
Protein
Download Length: 315 a.a. Molecular weight: 34506.70 Da Isoelectric Point: 10.0525
>NTDB_id=982058 NST40_RS06135 WP_036681839.1 1392264..1393211(+) (ceuB) [Paenibacillus sp. FSL R10-2778]
MKLKYLSLLLIVFSFISLFIGVKDISPLDLFHLTESQAQTLLVSRIPRLAALIIAGVSMSIAGLIMQQLSRNKFVSPTTA
GTMDSAKFGILVSLMLFTGATPMQKLLVAFVFALLGTFIFMRILDRIKFKDSIFIPLVGLMFGNIVGSITTFFAYKNDLI
QNISSWMLGDFSTIIKGQYELIYISIPLVILAYLFANKFTVAGMGEDFSVNLGMNYKAVVNVGLVIVALISSVVILTVGT
IPFLGLVVPNIVTLYIGDNLKKSLAHTAILGAVFLLFCDILGRLIIYPYEISISLTVGVIGSGLFIYLLMRRKAN
MKLKYLSLLLIVFSFISLFIGVKDISPLDLFHLTESQAQTLLVSRIPRLAALIIAGVSMSIAGLIMQQLSRNKFVSPTTA
GTMDSAKFGILVSLMLFTGATPMQKLLVAFVFALLGTFIFMRILDRIKFKDSIFIPLVGLMFGNIVGSITTFFAYKNDLI
QNISSWMLGDFSTIIKGQYELIYISIPLVILAYLFANKFTVAGMGEDFSVNLGMNYKAVVNVGLVIVALISSVVILTVGT
IPFLGLVVPNIVTLYIGDNLKKSLAHTAILGAVFLLFCDILGRLIIYPYEISISLTVGVIGSGLFIYLLMRRKAN
Nucleotide
Download Length: 948 bp
>NTDB_id=982058 NST40_RS06135 WP_036681839.1 1392264..1393211(+) (ceuB) [Paenibacillus sp. FSL R10-2778]
ATGAAACTAAAATATTTGTCCCTACTTCTAATAGTATTTTCATTTATATCTTTGTTTATAGGCGTTAAAGATATATCCCC
ATTAGATCTCTTTCATCTTACGGAATCTCAAGCACAGACCTTGCTGGTAAGCCGGATTCCCCGGTTAGCCGCATTGATTA
TCGCTGGAGTCAGTATGAGTATTGCCGGATTAATTATGCAACAGCTGTCACGCAATAAATTTGTCTCCCCGACTACGGCA
GGGACGATGGATTCCGCGAAATTTGGTATTCTCGTATCCCTCATGTTATTCACAGGCGCAACGCCAATGCAGAAATTGCT
GGTTGCTTTTGTTTTTGCACTATTGGGCACCTTTATTTTTATGAGAATCCTGGATCGGATCAAGTTCAAGGATAGTATTT
TTATCCCGCTGGTCGGACTCATGTTCGGCAACATTGTAGGCTCGATTACAACATTTTTTGCGTATAAAAATGATTTGATT
CAGAATATCTCGTCTTGGATGCTTGGAGATTTCTCAACGATTATCAAAGGCCAATACGAATTAATTTATATCAGCATTCC
ACTTGTCATCCTGGCGTATCTCTTCGCTAATAAATTTACGGTAGCCGGTATGGGCGAGGATTTCTCCGTTAATCTTGGCA
TGAATTACAAAGCGGTTGTCAACGTGGGATTGGTAATTGTAGCGTTAATCTCTTCTGTTGTCATTTTAACCGTAGGTACG
ATTCCATTTCTGGGTCTGGTAGTACCTAACATTGTAACGTTGTACATAGGAGATAACCTCAAAAAAAGTCTGGCGCATAC
AGCCATTCTCGGTGCGGTGTTCCTCCTGTTCTGCGATATTCTGGGCAGGCTCATTATCTATCCATATGAAATATCAATCA
GTCTCACGGTAGGCGTCATCGGTAGTGGTCTGTTTATCTACTTGCTGATGAGAAGAAAGGCGAACTAG
ATGAAACTAAAATATTTGTCCCTACTTCTAATAGTATTTTCATTTATATCTTTGTTTATAGGCGTTAAAGATATATCCCC
ATTAGATCTCTTTCATCTTACGGAATCTCAAGCACAGACCTTGCTGGTAAGCCGGATTCCCCGGTTAGCCGCATTGATTA
TCGCTGGAGTCAGTATGAGTATTGCCGGATTAATTATGCAACAGCTGTCACGCAATAAATTTGTCTCCCCGACTACGGCA
GGGACGATGGATTCCGCGAAATTTGGTATTCTCGTATCCCTCATGTTATTCACAGGCGCAACGCCAATGCAGAAATTGCT
GGTTGCTTTTGTTTTTGCACTATTGGGCACCTTTATTTTTATGAGAATCCTGGATCGGATCAAGTTCAAGGATAGTATTT
TTATCCCGCTGGTCGGACTCATGTTCGGCAACATTGTAGGCTCGATTACAACATTTTTTGCGTATAAAAATGATTTGATT
CAGAATATCTCGTCTTGGATGCTTGGAGATTTCTCAACGATTATCAAAGGCCAATACGAATTAATTTATATCAGCATTCC
ACTTGTCATCCTGGCGTATCTCTTCGCTAATAAATTTACGGTAGCCGGTATGGGCGAGGATTTCTCCGTTAATCTTGGCA
TGAATTACAAAGCGGTTGTCAACGTGGGATTGGTAATTGTAGCGTTAATCTCTTCTGTTGTCATTTTAACCGTAGGTACG
ATTCCATTTCTGGGTCTGGTAGTACCTAACATTGTAACGTTGTACATAGGAGATAACCTCAAAAAAAGTCTGGCGCATAC
AGCCATTCTCGGTGCGGTGTTCCTCCTGTTCTGCGATATTCTGGGCAGGCTCATTATCTATCCATATGAAATATCAATCA
GTCTCACGGTAGGCGTCATCGGTAGTGGTCTGTTTATCTACTTGCTGATGAGAAGAAAGGCGAACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
56.051 |
99.683 |
0.559 |