Detailed information NTG0981998

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACKVBY_RS07070
• Genome accession: NZ_CP183111
• Coordinates: 1476613..1477638 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 488
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1471613..1482638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKVBY_RS07060 (ACKVBY_07045)	rpmE	1473844..1474056 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACKVBY_RS07065 (ACKVBY_07050)	priA	1474259..1476457 (+)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
ACKVBY_RS07070 (ACKVBY_07055)	cytR	1476613..1477638 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACKVBY_RS07075 (ACKVBY_07060)	ftsN	1477730..1478689 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACKVBY_RS07080 (ACKVBY_07065)	hslV	1478782..1479312 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACKVBY_RS07085 (ACKVBY_07070)	hslU	1479322..1480653 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ACKVBY_RS07090 (ACKVBY_07075)	menA	1480720..1481646 (+)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACKVBY_RS07095 (ACKVBY_07080)	rraA	1481739..1482224 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACKVBY_RS07100 (ACKVBY_07085)	zapB	1482309..1482554 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=981998 ACKVBY_RS07070 WP_000644904.1 1476613..1477638(+) (cytR) [Escherichia coli strain 488]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=981998 ACKVBY_RS07070 WP_000644904.1 1476613..1477638(+) (cytR) [Escherichia coli strain 488]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628