Detailed information NTG0981918

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACKUF0_RS05820
• Genome accession: NZ_CP183105
• Coordinates: 788441..789466 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain 463
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 783441..794466

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKUF0_RS05790 (ACKUF0_05785)	zapB	783525..783770 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACKUF0_RS05795 (ACKUF0_05790)	rraA	783855..784340 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACKUF0_RS05800 (ACKUF0_05795)	menA	784433..785359 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACKUF0_RS05805 (ACKUF0_05800)	hslU	785426..786757 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACKUF0_RS05810 (ACKUF0_05805)	hslV	786767..787297 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACKUF0_RS05815 (ACKUF0_05810)	ftsN	787390..788349 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACKUF0_RS05820 (ACKUF0_05815)	cytR	788441..789466 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ACKUF0_RS05825 (ACKUF0_05820)	priA	789622..791820 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ACKUF0_RS05830 (ACKUF0_05825)	rpmE	792023..792235 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACKUF0_RS05835 (ACKUF0_05830)	yiiX	792296..792904 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ACKUF0_RS05840 (ACKUF0_05835)	metJ	792964..793281 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=981918 ACKUF0_RS05820 WP_000644908.1 788441..789466(-) (cytR) [Escherichia coli strain 463]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=981918 ACKUF0_RS05820 WP_000644908.1 788441..789466(-) (cytR) [Escherichia coli strain 463]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625