Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   NST83_RS16110 Genome accession   NZ_CP151951
Coordinates   3558451..3560214 (+) Length   587 a.a.
NCBI ID   WP_342414908.1    Uniprot ID   -
Organism   Paenibacillus sp. FSL R10-2782     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3553451..3565214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST83_RS16090 (NST83_16090) - 3553999..3555882 (+) 1884 WP_342414905.1 S8 family peptidase -
  NST83_RS16095 (NST83_16095) - 3555946..3556188 (-) 243 WP_137063801.1 hypothetical protein -
  NST83_RS16100 (NST83_16100) - 3556276..3557751 (-) 1476 WP_342414906.1 PLP-dependent aminotransferase family protein -
  NST83_RS16105 (NST83_16105) - 3557982..3558392 (+) 411 WP_342414907.1 MarR family winged helix-turn-helix transcriptional regulator -
  NST83_RS16110 (NST83_16110) rcrP 3558451..3560214 (+) 1764 WP_342414908.1 ABC transporter ATP-binding protein Regulator
  NST83_RS16115 (NST83_16115) rcrQ 3560207..3562057 (+) 1851 WP_342414909.1 ABC transporter ATP-binding protein Regulator
  NST83_RS16120 (NST83_16120) - 3562448..3563668 (+) 1221 WP_137063805.1 PLP-dependent aminotransferase family protein -
  NST83_RS16130 (NST83_16130) - 3564446..3565012 (-) 567 WP_342414910.1 flavin reductase family protein -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64877.36 Da        Isoelectric Point: 8.5041

>NTDB_id=981874 NST83_RS16110 WP_342414908.1 3558451..3560214(+) (rcrP) [Paenibacillus sp. FSL R10-2782]
MLKIFKYLKKNEWMLVLCSLAFIVVQVWLDLKLPDYMAEITTKLQTEGTPMSELLIPGSYMLLCAVGSMIASIIVGYFAA
KVAAGLAMRLRAMVFDKTLSFSMEEMNNFSTASLITRTTNDVTQIQTIVALGLQVIIKAPILAVWAIVKIADKNWQWTAS
TGAAVAVLILMLSVIVIFALPSFQRIQRLTDNLNRVTREHLTGLRVVRAYNADQYQEQKFEQANVELTNTNLFANRLMAM
IGPGMTFIMSGLSVAIYWIGAYLINGTAVPDRIALFSNMVVFSSYAMQVVMAFMMVSMIFFLLPRASISAKRIMEVLNTK
SSIMNGHETAGEEGVMGQVEFRNVSFKYPDAEEPVLRNISFTAKRGETVAFIGATGSGKTSVINLIPRFYDVTEGEVLVD
GVNVRNYKQQALHNKIGYVPQRAVLFNGTVASNVSYGDNGKEGASEKLVKAAVGIAQSTEFVEKMDGQYQGRISQGGANV
SGGQKQRLSIARAIYRQPEIYIFDDSFSALDYKTDRILRSALKKETDHATTLIVAQRIGTIKDADRIIVLEQGEVVGSGT
HDELMANCSTYQEIAYSQLSKEELVHG

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=981874 NST83_RS16110 WP_342414908.1 3558451..3560214(+) (rcrP) [Paenibacillus sp. FSL R10-2782]
ATGCTGAAGATATTCAAATATCTCAAGAAAAATGAATGGATGCTCGTGCTTTGCAGCCTGGCTTTCATTGTTGTGCAGGT
ATGGCTTGATCTGAAGCTGCCTGATTATATGGCGGAAATTACGACCAAGCTGCAAACGGAAGGAACACCTATGTCGGAAC
TGCTGATTCCCGGCAGTTACATGCTGTTATGTGCCGTTGGCAGTATGATTGCATCTATTATTGTCGGCTATTTCGCGGCG
AAGGTGGCGGCAGGGCTGGCCATGCGTCTGCGTGCGATGGTCTTTGATAAGACCTTATCCTTTTCGATGGAAGAGATGAA
CAACTTTTCGACGGCAAGCCTCATCACCCGCACCACAAACGATGTTACCCAGATTCAAACGATCGTTGCGTTAGGACTCC
AGGTGATCATCAAGGCACCAATTTTGGCCGTGTGGGCTATTGTGAAGATTGCGGATAAAAACTGGCAGTGGACCGCCTCT
ACAGGAGCGGCCGTGGCTGTTCTGATCCTGATGCTAAGTGTTATTGTTATTTTCGCTCTCCCCAGTTTCCAGCGAATCCA
GCGTCTCACCGATAATCTGAACAGGGTAACACGTGAGCATTTGACCGGACTTCGAGTGGTGCGCGCTTATAATGCAGATC
AGTATCAGGAGCAGAAGTTCGAACAGGCCAACGTCGAATTGACGAATACAAACCTGTTTGCGAACAGGTTAATGGCGATG
ATTGGCCCGGGTATGACCTTTATTATGTCGGGTCTGAGTGTCGCTATCTATTGGATTGGCGCTTACCTGATTAACGGGAC
GGCCGTGCCCGACCGCATTGCACTGTTCTCCAATATGGTGGTGTTCTCGTCTTATGCGATGCAGGTGGTCATGGCCTTTA
TGATGGTTAGTATGATTTTCTTCTTGCTGCCTCGCGCTTCGATTTCTGCCAAACGGATCATGGAGGTATTGAACACCAAA
TCCAGCATCATGAACGGGCATGAGACGGCTGGAGAAGAGGGCGTTATGGGTCAGGTTGAATTCCGTAATGTCAGCTTCAA
ATATCCAGACGCGGAGGAGCCTGTGCTTCGCAACATTAGCTTTACGGCGAAACGGGGCGAGACGGTTGCCTTTATTGGCG
CAACAGGCAGCGGCAAAACCAGCGTGATCAATCTGATTCCCCGTTTCTACGATGTGACCGAGGGAGAGGTGCTCGTGGAT
GGTGTGAATGTCAGAAACTATAAGCAGCAGGCACTCCATAACAAAATCGGGTATGTCCCTCAGAGAGCCGTGCTTTTCAA
CGGTACGGTGGCATCCAACGTTTCGTATGGCGATAACGGAAAAGAAGGAGCTTCGGAAAAACTCGTTAAAGCAGCCGTAG
GGATTGCCCAAAGCACGGAGTTTGTCGAAAAAATGGACGGTCAGTATCAGGGACGGATTTCACAAGGTGGAGCGAACGTA
TCAGGCGGTCAAAAGCAGCGTCTGTCCATTGCGCGTGCCATCTACCGTCAGCCGGAGATTTATATCTTCGATGATTCCTT
TTCAGCACTAGACTACAAAACAGACCGGATTCTGCGCTCGGCTCTCAAAAAAGAAACTGACCATGCTACCACACTCATTG
TTGCTCAGCGCATAGGCACCATTAAAGACGCTGACCGAATTATCGTACTGGAACAGGGTGAGGTTGTAGGAAGCGGCACA
CATGATGAGCTGATGGCGAACTGCAGCACCTATCAGGAGATCGCTTATTCGCAGCTTTCGAAGGAGGAACTCGTACATGG
ATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-292)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

53.088

100

0.542

Multiple sequence alignment