Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | R8625_RS03740 | Genome accession | NZ_AP026923 |
| Coordinates | 734976..737234 (-) | Length | 752 a.a. |
| NCBI ID | WP_317649363.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PZ900700054 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 729976..742234
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8625_RS03720 (PC0054_07360) | tnpB | 732428..732664 (-) | 237 | WP_050356570.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| R8625_RS03725 (PC0054_07370) | - | 732925..733224 (-) | 300 | WP_000767195.1 | DUF1827 family protein | - |
| R8625_RS03730 (PC0054_07380) | - | 733389..733811 (-) | 423 | WP_023396624.1 | NUDIX hydrolase | - |
| R8625_RS03735 | - | 733922..734771 (+) | 850 | Protein_740 | IS630 family transposase | - |
| R8625_RS03740 (PC0054_07400) | clpE | 734976..737234 (-) | 2259 | WP_317649363.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| R8625_RS03745 (PC0054_07410) | - | 737463..737693 (-) | 231 | WP_000443573.1 | YkuJ family protein | - |
| R8625_RS03750 (PC0054_07420) | - | 737883..738566 (+) | 684 | WP_001011637.1 | amino acid ABC transporter permease | - |
| R8625_RS03755 (PC0054_07430) | - | 738566..739300 (+) | 735 | WP_000140959.1 | amino acid ABC transporter ATP-binding protein | - |
| R8625_RS03760 (PC0054_07440) | - | 739454..740311 (+) | 858 | WP_162498108.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| R8625_RS03765 (PC0054_07450) | - | 740453..741325 (+) | 873 | WP_317649364.1 | NAD(P)H-hydrate dehydratase | - |
Sequence
Protein
Download Length: 752 a.a. Molecular weight: 83794.33 Da Isoelectric Point: 5.5494
>NTDB_id=98178 R8625_RS03740 WP_317649363.1 734976..737234(-) (clpE) [Streptococcus pneumoniae strain PZ900700054]
MLCQNCKINDSTIHLYTNLNGKQKQIDLCQNCYKIIKTDPNNSLFKGMTDLNNRDFDPFGDFFNDLNNFRPSSNTPPIPP
TQSGGGYGGNGGYGSQNRGSAQTPPPSQEKGLLKEFGINVTEIARRGDIDPVIGRDDEIIRVIEILNRRTKNNPVLIGEP
GVGKTAVVEGLAQKIVDGDVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSA
SDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVDETITILKGIQKKYEDYHHVQYTDAA
IEAAATLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKSQATREEDFEKAAYFRDQIAKYKEM
QKKKITDQDTPIISEKTIEHIIEQKTNIPVGDLKEKEQSQLIHLAEDLKSHVIGQDDAVDKIAKAIRRNRVGLGTPNRPI
GSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDE
VEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEFMNRF
DGIIEFKSLSKDNLLQIVELMLADVNKRLSSNNIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDYIEDAITDYYLENP
SEKDLKAVMTSKGKIQIKSAKKAEVKTSEKEV
MLCQNCKINDSTIHLYTNLNGKQKQIDLCQNCYKIIKTDPNNSLFKGMTDLNNRDFDPFGDFFNDLNNFRPSSNTPPIPP
TQSGGGYGGNGGYGSQNRGSAQTPPPSQEKGLLKEFGINVTEIARRGDIDPVIGRDDEIIRVIEILNRRTKNNPVLIGEP
GVGKTAVVEGLAQKIVDGDVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSA
SDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVDETITILKGIQKKYEDYHHVQYTDAA
IEAAATLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKSQATREEDFEKAAYFRDQIAKYKEM
QKKKITDQDTPIISEKTIEHIIEQKTNIPVGDLKEKEQSQLIHLAEDLKSHVIGQDDAVDKIAKAIRRNRVGLGTPNRPI
GSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDE
VEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEFMNRF
DGIIEFKSLSKDNLLQIVELMLADVNKRLSSNNIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDYIEDAITDYYLENP
SEKDLKAVMTSKGKIQIKSAKKAEVKTSEKEV
Nucleotide
Download Length: 2259 bp
>NTDB_id=98178 R8625_RS03740 WP_317649363.1 734976..737234(-) (clpE) [Streptococcus pneumoniae strain PZ900700054]
ATGCTTTGTCAAAACTGTAAAATTAACGACTCAACAATTCATCTTTACACCAATCTCAATGGAAAACAAAAACAAATTGA
CCTCTGTCAAAACTGCTATAAGATTATCAAAACAGATCCTAACAATAGCCTCTTCAAAGGTATGACGGATCTGAACAATC
GTGACTTCGATCCCTTTGGTGATTTCTTCAATGATCTAAACAATTTCAGACCTTCTAGCAATACTCCTCCTATTCCCCCA
ACCCAATCAGGTGGAGGTTACGGTGGAAACGGCGGTTATGGTTCCCAAAATCGTGGATCTGCTCAAACTCCGCCACCTAG
CCAAGAAAAAGGCCTGCTGAAAGAATTTGGTATTAATGTAACTGAAATTGCCCGTCGTGGAGACATTGACCCCGTTATTG
GGCGCGACGATGAGATTATCCGTGTCATCGAGATTCTCAATCGTAGAACCAAGAATAATCCTGTCCTTATCGGTGAACCT
GGTGTCGGAAAAACGGCCGTTGTCGAAGGTCTAGCTCAGAAAATTGTCGATGGCGATGTGCCACATAAACTCCAAGGTAA
ACAAGTCATCCGTCTGGATGTGGTTAGCTTAGTTCAAGGAACGGGGATTCGAGGACAATTTGAAGAACGCATGCAAAAAC
TCATGGAAGAAATTCGCAAACGTGAAGACATCATCCTCTTTATCGATGAAATCCATGAAATTGTTGGTGCTGGTTCTGCG
AGTGATGGTAATATGGACGCAGGAAATATCCTCAAGCCAGCCCTTGCTCGTGGAGAACTGCAACTAGTCGGTGCTACTAC
CCTCAATGAATACCGTATCATTGAAAAGGATGCTGCCCTCGAGCGTCGTATGCAGCCTGTTAAAGTAGATGAACCAACGG
TGGATGAAACAATCACTATTCTCAAAGGGATTCAAAAGAAATACGAAGATTACCACCACGTTCAATATACCGATGCTGCG
ATTGAAGCAGCTGCAACTCTTTCCAATCGCTACATCCAAGATCGCTTCTTGCCTGACAAGGCCATTGACCTCCTAGATGA
AGCTGGTTCTAAGATGAACTTGACCTTGAATTTTGTGGATCCTAAAGTAATTGATCAGCGCTTGATTGAGGCTGAAAATC
TCAAGTCTCAAGCTACACGAGAAGAAGATTTTGAGAAGGCGGCCTACTTCCGCGACCAGATTGCCAAGTATAAGGAAATG
CAAAAGAAAAAGATCACAGACCAAGATACTCCTATCATCAGCGAGAAAACTATTGAGCACATTATTGAGCAGAAAACCAA
TATCCCTGTTGGTGATTTGAAAGAGAAAGAACAATCTCAACTCATCCATCTAGCCGAAGATCTCAAGTCTCATGTTATTG
GACAAGATGATGCTGTCGATAAGATTGCCAAGGCTATTCGCCGTAATCGTGTCGGTCTCGGTACACCTAACCGCCCAATC
GGAAGCTTCCTCTTCGTCGGACCAACTGGTGTCGGTAAGACAGAACTTTCCAAACAACTAGCTATCGAACTCTTTGGTTC
TGCTGACAGTATGATTCGCTTTGATATGAGTGAATACATGGAAAAACATAGTGTGGCTAAGTTGGTCGGCGCTCCTCCAG
GTTATGTTGGCTATGATGAGGCTGGACAATTAACTGAAAAAGTTCGCCGCAATCCATATTCTCTTATTCTCTTGGATGAA
GTAGAAAAAGCCCATCCAGATGTCATGCACATGTTCCTCCAGGTCTTGGACGATGGTCGTTTGACAGATGGGCAAGGACG
TACCGTCAGCTTCAAGGATGCCATTATTATCATGACTTCAAATGCAGGGACAGGTAAGGCTGAAGCCAGCGTTGGTTTTG
GGGCTGCTCGCGAAGGACGTACCAACTCTGTTCTCGGTGAACTCGGTAACTTCTTTAGCCCAGAGTTTATGAACCGTTTT
GATGGTATTATCGAATTTAAGTCTCTCAGCAAAGATAACCTCCTTCAGATTGTCGAGCTTATGCTAGCAGACGTTAACAA
GCGCCTTTCTAGCAACAACATTCATTTGGATGTAACTGACAAGGTCAAGGAAAAATTGGTTGACCTCGGTTATGATCCAA
AAATGGGGGCGCGCCCACTTCGTCGTACTATTCAAGACTATATTGAGGACGCAATCACTGACTACTACCTTGAAAATCCA
AGCGAAAAAGACCTCAAGGCAGTTATGACCAGCAAGGGTAAGATTCAAATTAAGTCTGCCAAAAAAGCTGAAGTTAAAAC
TTCTGAAAAAGAAGTATAA
ATGCTTTGTCAAAACTGTAAAATTAACGACTCAACAATTCATCTTTACACCAATCTCAATGGAAAACAAAAACAAATTGA
CCTCTGTCAAAACTGCTATAAGATTATCAAAACAGATCCTAACAATAGCCTCTTCAAAGGTATGACGGATCTGAACAATC
GTGACTTCGATCCCTTTGGTGATTTCTTCAATGATCTAAACAATTTCAGACCTTCTAGCAATACTCCTCCTATTCCCCCA
ACCCAATCAGGTGGAGGTTACGGTGGAAACGGCGGTTATGGTTCCCAAAATCGTGGATCTGCTCAAACTCCGCCACCTAG
CCAAGAAAAAGGCCTGCTGAAAGAATTTGGTATTAATGTAACTGAAATTGCCCGTCGTGGAGACATTGACCCCGTTATTG
GGCGCGACGATGAGATTATCCGTGTCATCGAGATTCTCAATCGTAGAACCAAGAATAATCCTGTCCTTATCGGTGAACCT
GGTGTCGGAAAAACGGCCGTTGTCGAAGGTCTAGCTCAGAAAATTGTCGATGGCGATGTGCCACATAAACTCCAAGGTAA
ACAAGTCATCCGTCTGGATGTGGTTAGCTTAGTTCAAGGAACGGGGATTCGAGGACAATTTGAAGAACGCATGCAAAAAC
TCATGGAAGAAATTCGCAAACGTGAAGACATCATCCTCTTTATCGATGAAATCCATGAAATTGTTGGTGCTGGTTCTGCG
AGTGATGGTAATATGGACGCAGGAAATATCCTCAAGCCAGCCCTTGCTCGTGGAGAACTGCAACTAGTCGGTGCTACTAC
CCTCAATGAATACCGTATCATTGAAAAGGATGCTGCCCTCGAGCGTCGTATGCAGCCTGTTAAAGTAGATGAACCAACGG
TGGATGAAACAATCACTATTCTCAAAGGGATTCAAAAGAAATACGAAGATTACCACCACGTTCAATATACCGATGCTGCG
ATTGAAGCAGCTGCAACTCTTTCCAATCGCTACATCCAAGATCGCTTCTTGCCTGACAAGGCCATTGACCTCCTAGATGA
AGCTGGTTCTAAGATGAACTTGACCTTGAATTTTGTGGATCCTAAAGTAATTGATCAGCGCTTGATTGAGGCTGAAAATC
TCAAGTCTCAAGCTACACGAGAAGAAGATTTTGAGAAGGCGGCCTACTTCCGCGACCAGATTGCCAAGTATAAGGAAATG
CAAAAGAAAAAGATCACAGACCAAGATACTCCTATCATCAGCGAGAAAACTATTGAGCACATTATTGAGCAGAAAACCAA
TATCCCTGTTGGTGATTTGAAAGAGAAAGAACAATCTCAACTCATCCATCTAGCCGAAGATCTCAAGTCTCATGTTATTG
GACAAGATGATGCTGTCGATAAGATTGCCAAGGCTATTCGCCGTAATCGTGTCGGTCTCGGTACACCTAACCGCCCAATC
GGAAGCTTCCTCTTCGTCGGACCAACTGGTGTCGGTAAGACAGAACTTTCCAAACAACTAGCTATCGAACTCTTTGGTTC
TGCTGACAGTATGATTCGCTTTGATATGAGTGAATACATGGAAAAACATAGTGTGGCTAAGTTGGTCGGCGCTCCTCCAG
GTTATGTTGGCTATGATGAGGCTGGACAATTAACTGAAAAAGTTCGCCGCAATCCATATTCTCTTATTCTCTTGGATGAA
GTAGAAAAAGCCCATCCAGATGTCATGCACATGTTCCTCCAGGTCTTGGACGATGGTCGTTTGACAGATGGGCAAGGACG
TACCGTCAGCTTCAAGGATGCCATTATTATCATGACTTCAAATGCAGGGACAGGTAAGGCTGAAGCCAGCGTTGGTTTTG
GGGCTGCTCGCGAAGGACGTACCAACTCTGTTCTCGGTGAACTCGGTAACTTCTTTAGCCCAGAGTTTATGAACCGTTTT
GATGGTATTATCGAATTTAAGTCTCTCAGCAAAGATAACCTCCTTCAGATTGTCGAGCTTATGCTAGCAGACGTTAACAA
GCGCCTTTCTAGCAACAACATTCATTTGGATGTAACTGACAAGGTCAAGGAAAAATTGGTTGACCTCGGTTATGATCCAA
AAATGGGGGCGCGCCCACTTCGTCGTACTATTCAAGACTATATTGAGGACGCAATCACTGACTACTACCTTGAAAATCCA
AGCGAAAAAGACCTCAAGGCAGTTATGACCAGCAAGGGTAAGATTCAAATTAAGTCTGCCAAAAAAGCTGAAGTTAAAAC
TTCTGAAAAAGAAGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus pneumoniae Rx1 |
98.935 |
99.867 |
0.988 |
| clpE | Streptococcus pneumoniae D39 |
98.935 |
99.867 |
0.988 |
| clpE | Streptococcus pneumoniae R6 |
98.935 |
99.867 |
0.988 |
| clpE | Streptococcus pneumoniae TIGR4 |
98.802 |
99.867 |
0.987 |
| clpE | Streptococcus mutans UA159 |
82.8 |
99.734 |
0.826 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
75.099 |
100 |
0.758 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.331 |
89.894 |
0.461 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.309 |
82.58 |
0.399 |
| clpC | Streptococcus pneumoniae Rx1 |
46.91 |
83.91 |
0.394 |
| clpC | Streptococcus pneumoniae D39 |
46.91 |
83.91 |
0.394 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.91 |
83.91 |
0.394 |
| clpC | Streptococcus thermophilus LMD-9 |
46.955 |
82.979 |
0.39 |
| clpC | Streptococcus mutans UA159 |
46.571 |
83.378 |
0.388 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.56 |
83.112 |
0.387 |