Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   NYE22_RS20260 Genome accession   NZ_CP151946
Coordinates   3808643..3808783 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus sp. FSL K6-1560     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 3803643..3813783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE22_RS20255 (NYE22_20255) - 3807525..3808697 (-) 1173 Protein_3953 condensation domain-containing protein -
  NYE22_RS20260 (NYE22_20260) comS 3808643..3808783 (-) 141 WP_010886404.1 competence protein ComS Regulator
  NYE22_RS20265 (NYE22_20265) srfAB 3808827..3811919 (-) 3093 Protein_3955 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=981751 NYE22_RS20260 WP_010886404.1 3808643..3808783(-) (comS) [Bacillus sp. FSL K6-1560]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=981751 NYE22_RS20260 WP_010886404.1 3808643..3808783(-) (comS) [Bacillus sp. FSL K6-1560]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment