Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NYE22_RS17685 Genome accession   NZ_CP151946
Coordinates   3293238..3294032 (-) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1560     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3288238..3299032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE22_RS17650 (NYE22_17650) ephM 3289081..3289941 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  NYE22_RS17655 (NYE22_17655) spdL 3289928..3290260 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  NYE22_RS17660 (NYE22_17660) - 3290345..3290863 (-) 519 WP_085187167.1 SH3 domain-containing protein -
  NYE22_RS17665 (NYE22_17665) - 3291008..3291277 (-) 270 WP_003243789.1 YfhJ family protein -
  NYE22_RS17670 (NYE22_17670) - 3291402..3291554 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NYE22_RS17675 (NYE22_17675) - 3291586..3292779 (-) 1194 WP_003243500.1 MFS transporter -
  NYE22_RS17680 (NYE22_17680) - 3292922..3293236 (-) 315 WP_049140592.1 YfhH family protein -
  NYE22_RS17685 (NYE22_17685) recX 3293238..3294032 (-) 795 WP_029726844.1 recombination regulator RecX Regulator
  NYE22_RS17690 (NYE22_17690) - 3294121..3295032 (+) 912 WP_282627466.1 TIGR01777 family oxidoreductase -
  NYE22_RS17695 (NYE22_17695) - 3295086..3295196 (+) 111 WP_003223230.1 YfhE family protein -
  NYE22_RS17700 (NYE22_17700) - 3295263..3295454 (+) 192 WP_003233561.1 YfhD family protein -
  NYE22_RS17705 (NYE22_17705) - 3295493..3296077 (-) 585 WP_342412014.1 nitroreductase -
  NYE22_RS17710 (NYE22_17710) - 3296165..3297046 (-) 882 WP_125121377.1 PhzF family phenazine biosynthesis isomerase -
  NYE22_RS17715 (NYE22_17715) - 3297161..3298192 (-) 1032 WP_342412015.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=981746 NYE22_RS17685 WP_029726844.1 3293238..3294032(-) (recX) [Bacillus sp. FSL K6-1560]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=981746 NYE22_RS17685 WP_029726844.1 3293238..3294032(-) (recX) [Bacillus sp. FSL K6-1560]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment