Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NYE22_RS16145 Genome accession   NZ_CP151946
Coordinates   3011473..3011664 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus sp. FSL K6-1560     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3006473..3016664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE22_RS16120 (NYE22_16120) appD 3006801..3007787 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  NYE22_RS16125 (NYE22_16125) - 3007979..3008764 (-) 786 WP_342411974.1 DUF2268 domain-containing protein -
  NYE22_RS16130 (NYE22_16130) fabF 3008840..3010081 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  NYE22_RS16135 (NYE22_16135) fabH 3010104..3011042 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  NYE22_RS16140 (NYE22_16140) yjzB 3011207..3011443 (+) 237 WP_072173825.1 spore coat protein YjzB -
  NYE22_RS16145 (NYE22_16145) comZ 3011473..3011664 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NYE22_RS16150 (NYE22_16150) med 3011679..3012632 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  NYE22_RS16155 (NYE22_16155) - 3012723..3013280 (-) 558 WP_342411975.1 hypothetical protein -
  NYE22_RS16160 (NYE22_16160) - 3013362..3014096 (-) 735 WP_342411976.1 hypothetical protein -
  NYE22_RS16165 (NYE22_16165) - 3014345..3014530 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  NYE22_RS16170 (NYE22_16170) - 3014577..3014756 (-) 180 WP_003245356.1 YjzC family protein -
  NYE22_RS16175 (NYE22_16175) argF 3014842..3015801 (-) 960 WP_014476421.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=981737 NYE22_RS16145 WP_003224559.1 3011473..3011664(-) (comZ) [Bacillus sp. FSL K6-1560]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=981737 NYE22_RS16145 WP_003224559.1 3011473..3011664(-) (comZ) [Bacillus sp. FSL K6-1560]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment