Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NYE22_RS14655 Genome accession   NZ_CP151946
Coordinates   2744501..2744965 (+) Length   154 a.a.
NCBI ID   WP_342411932.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1560     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2739501..2749965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE22_RS14635 (NYE22_14635) fadH 2740689..2741453 (-) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -
  NYE22_RS14640 (NYE22_14640) - 2741596..2742456 (+) 861 WP_024573035.1 metallophosphoesterase -
  NYE22_RS14645 (NYE22_14645) - 2742513..2743007 (+) 495 WP_072174092.1 L,D-transpeptidase family protein -
  NYE22_RS14650 (NYE22_14650) - 2743083..2744375 (+) 1293 WP_014479656.1 MFS transporter -
  NYE22_RS14655 (NYE22_14655) kre 2744501..2744965 (+) 465 WP_342411932.1 YkyB family protein Regulator
  NYE22_RS14660 (NYE22_14660) cheV 2745009..2745920 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  NYE22_RS14665 (NYE22_14665) - 2746124..2746285 (+) 162 WP_219144865.1 hypothetical protein -
  NYE22_RS14670 (NYE22_14670) - 2746487..2747668 (+) 1182 WP_342411933.1 aminotransferase A -
  NYE22_RS14675 (NYE22_14675) kinA 2747678..2749498 (-) 1821 WP_101502063.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17877.67 Da        Isoelectric Point: 10.3545

>NTDB_id=981729 NYE22_RS14655 WP_342411932.1 2744501..2744965(+) (kre) [Bacillus sp. FSL K6-1560]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGIKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=981729 NYE22_RS14655 WP_342411932.1 2744501..2744965(+) (kre) [Bacillus sp. FSL K6-1560]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTAAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTTTTGCAAGAATATGTCGGCATAAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994

Multiple sequence alignment