Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NYE22_RS14555 Genome accession   NZ_CP151946
Coordinates   2728533..2729117 (-) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus sp. FSL K6-1560     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2723533..2734117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE22_RS14530 (NYE22_14530) mobB 2723929..2724450 (-) 522 WP_042974935.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NYE22_RS14535 (NYE22_14535) glp 2724411..2725703 (-) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  NYE22_RS14540 (NYE22_14540) - 2725721..2726740 (-) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  NYE22_RS14545 (NYE22_14545) - 2726791..2727390 (-) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  NYE22_RS14550 (NYE22_14550) cse15 2727527..2728492 (+) 966 WP_342411930.1 spore protein Cse15 -
  NYE22_RS14555 (NYE22_14555) rok 2728533..2729117 (-) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  NYE22_RS14560 (NYE22_14560) ykuV 2729583..2730029 (-) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  NYE22_RS14565 (NYE22_14565) ahpA 2730100..2730642 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NYE22_RS14570 (NYE22_14570) mscT 2730879..2731682 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  NYE22_RS14575 (NYE22_14575) - 2731719..2731964 (-) 246 WP_003232382.1 YkuS family protein -
  NYE22_RS14580 (NYE22_14580) - 2732026..2733150 (-) 1125 WP_043857415.1 N-acetyldiaminopimelate deacetylase -
  NYE22_RS14585 (NYE22_14585) dapD 2733220..2733930 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=981728 NYE22_RS14555 WP_014113628.1 2728533..2729117(-) (rok) [Bacillus sp. FSL K6-1560]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=981728 NYE22_RS14555 WP_014113628.1 2728533..2729117(-) (rok) [Bacillus sp. FSL K6-1560]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment