Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACNM7T_RS19640 Genome accession   NZ_CP183041
Coordinates   3947436..3948230 (-) Length   264 a.a.
NCBI ID   WP_007407895.1    Uniprot ID   A7ZAN9
Organism   Bacillus amyloliquefaciens strain Scm     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3942436..3953230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNM7T_RS19620 (ACNM7T_19620) - 3942796..3943803 (-) 1008 WP_191973989.1 ThiF family adenylyltransferase -
  ACNM7T_RS19625 (ACNM7T_19625) - 3944035..3945453 (-) 1419 WP_234631085.1 sensor histidine kinase -
  ACNM7T_RS19630 (ACNM7T_19630) - 3945450..3945659 (-) 210 WP_015240949.1 winged helix-turn-helix domain-containing protein -
  ACNM7T_RS19635 (ACNM7T_19635) htrA 3946153..3947349 (-) 1197 WP_022554034.1 S1C family serine protease Regulator
  ACNM7T_RS19640 (ACNM7T_19640) vicX 3947436..3948230 (-) 795 WP_007407895.1 MBL fold metallo-hydrolase Regulator
  ACNM7T_RS19645 (ACNM7T_19645) - 3948245..3949084 (-) 840 WP_039063871.1 two-component system regulatory protein YycI -
  ACNM7T_RS19650 (ACNM7T_19650) yycH 3949071..3950429 (-) 1359 WP_106080291.1 two-component system activity regulator YycH -
  ACNM7T_RS19655 (ACNM7T_19655) walK 3950419..3952254 (-) 1836 WP_004393106.1 cell wall metabolism sensor histidine kinase WalK -
  ACNM7T_RS19660 (ACNM7T_19660) walR 3952261..3952968 (-) 708 WP_004393104.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29116.20 Da        Isoelectric Point: 6.0280

>NTDB_id=981641 ACNM7T_RS19640 WP_007407895.1 3947436..3948230(-) (vicX) [Bacillus amyloliquefaciens strain Scm]
MGLQFSVLASGSTGNAFYLETEEHSFLVDAGLSGKAMDGLMEKIGRKIDDVDGIFVTHEHSDHIKGLGVIARKYGLPVYA
NEKTWKAMENQIGKLDTGQKFLFPMESVKSFGGLDVESFGVSHDAAEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFVAGETFQLFDTDPKIPTPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=981641 ACNM7T_RS19640 WP_007407895.1 3947436..3948230(-) (vicX) [Bacillus amyloliquefaciens strain Scm]
ATGGGCTTGCAATTTAGCGTGCTTGCGAGCGGGAGTACCGGAAACGCGTTTTATCTGGAGACAGAGGAGCACTCTTTTCT
GGTGGATGCCGGCCTGAGCGGTAAAGCGATGGACGGGCTGATGGAGAAAATCGGCCGCAAGATAGACGACGTCGACGGCA
TCTTTGTCACTCACGAGCACAGCGACCATATTAAAGGGCTCGGCGTCATTGCGAGAAAGTACGGTCTTCCCGTCTACGCC
AATGAAAAGACGTGGAAAGCGATGGAGAATCAGATCGGCAAGCTGGATACCGGACAAAAGTTTCTGTTCCCGATGGAAAG
CGTAAAATCCTTCGGCGGGCTTGATGTTGAGTCATTCGGCGTCTCTCATGACGCGGCCGAGCCGATGTTTTATGTTTTCC
ACTACCAAGGCAGAAAGCTCGCACTGATGACGGACACAGGGTATGTGAGCGACAGAATGAAAGGCATTATCCGTTCGGCC
AATGTGTTTGTGTTTGAAAGCAACCATGATGTCGGCATGCTGCAAATGGGCAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGCGATGTCGGCCACGTCTCCAATGAAGATGCGGCGCTCGCCATGACTGATGTCATCGGCGACGGCACATCGCGCA
TCTATTTGGCGCATCTGAGCCAAGACAACAATATGAAGGAACTGGCGAGAATGTCCGTGCAGCAGACATTGGCTGCGAAA
GGATTTGTCGCCGGGGAAACGTTTCAGTTATTTGATACCGATCCGAAAATCCCGACGCCGCTGTGCGCCGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7ZAN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

52.852

99.621

0.527