Detailed information NTG0981634

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NYE38_RS18380
• Genome accession: NZ_CP151944
• Coordinates: 3663613..3664758 (+)
• Length: 381 a.a.
• NCBI ID: WP_024085922.1
• Uniprot ID: -
• Organism: Bacillus sp. EU63
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3658613..3669758

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE38_RS18360 (NYE38_18360)	fnr	3659087..3659803 (-)	717	WP_326128228.1	fumarate/nitrate reduction transcriptional regulator Fnr	-
NYE38_RS18365 (NYE38_18365)	narK	3659901..3661091 (-)	1191	WP_017418712.1	nitrate transporter NarK	-
NYE38_RS18370 (NYE38_18370)	argS	3661226..3662896 (-)	1671	WP_340801777.1	arginine--tRNA ligase	-
NYE38_RS18375 (NYE38_18375)	-	3662893..3663321 (-)	429	WP_014419128.1	DUF1934 family protein	-
NYE38_RS18380 (NYE38_18380)	rapF	3663613..3664758 (+)	1146	WP_024085922.1	Rap family tetratricopeptide repeat protein	Regulator
NYE38_RS18385 (NYE38_18385)	-	3664742..3664861 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
NYE38_RS18390 (NYE38_18390)	speB	3664984..3665856 (-)	873	WP_007614448.1	agmatinase	-
NYE38_RS18395 (NYE38_18395)	speE	3665915..3666745 (-)	831	WP_003151052.1	spermidine synthase	-
NYE38_RS18400 (NYE38_18400)	-	3666945..3669017 (+)	2073	WP_017418705.1	transglycosylase domain-containing protein	-
NYE38_RS18405 (NYE38_18405)	-	3669042..3669473 (-)	432	WP_017418704.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45768.27 Da
• Isoelectric Point: 5.0694

>NTDB_id=981634 NYE38_RS18380 WP_024085922.1 3663613..3664758(+) (rapF) [Bacillus sp. EU63]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=981634 NYE38_RS18380 WP_024085922.1 3663613..3664758(+) (rapF) [Bacillus sp. EU63]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGCCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533