Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACNM7T_RS14605 Genome accession   NZ_CP183041
Coordinates   2976794..2977489 (-) Length   231 a.a.
NCBI ID   WP_014305616.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain Scm     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2971794..2982489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNM7T_RS14585 (ACNM7T_14585) - 2972175..2972894 (-) 720 WP_038459565.1 TIGR02206 family membrane protein -
  ACNM7T_RS14590 (ACNM7T_14590) - 2973002..2974942 (-) 1941 WP_032868344.1 FtsX-like permease family protein -
  ACNM7T_RS14595 (ACNM7T_14595) - 2974939..2975694 (-) 756 WP_015240420.1 ABC transporter ATP-binding protein -
  ACNM7T_RS14600 (ACNM7T_14600) - 2975797..2976801 (-) 1005 WP_052827747.1 sensor histidine kinase -
  ACNM7T_RS14605 (ACNM7T_14605) braR 2976794..2977489 (-) 696 WP_014305616.1 response regulator transcription factor Regulator
  ACNM7T_RS14610 (ACNM7T_14610) - 2977553..2978863 (-) 1311 WP_015240422.1 ABC transporter permease -
  ACNM7T_RS14615 (ACNM7T_14615) - 2978853..2979548 (-) 696 WP_032871660.1 ABC transporter ATP-binding protein -
  ACNM7T_RS14620 (ACNM7T_14620) - 2979564..2980544 (-) 981 WP_038459571.1 ABC transporter permease ytrC -
  ACNM7T_RS14625 (ACNM7T_14625) - 2980581..2981567 (-) 987 WP_038459573.1 ABC transporter permease -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26853.11 Da        Isoelectric Point: 7.1196

>NTDB_id=981612 ACNM7T_RS14605 WP_014305616.1 2976794..2977489(-) (braR) [Bacillus amyloliquefaciens strain Scm]
MFHILLIEDDNTLFHEMKERLTGWSFAVHGIKDFSRVIREFTEIKPDLVIIDVQLPKFDGFHWCRMIRSQSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAVFRRVHQYGTEPALMKRWCGAVIDTETNTVSRKNGSVELTKNEMLI
LKLLAEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDQLGIGKMIETKVGQGYIAKEEDGLYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=981612 ACNM7T_RS14605 WP_014305616.1 2976794..2977489(-) (braR) [Bacillus amyloliquefaciens strain Scm]
ATGTTTCACATTTTGTTAATAGAAGATGATAACACTTTATTTCACGAGATGAAAGAGAGATTAACGGGCTGGTCATTTGC
GGTGCACGGAATAAAAGATTTCAGCCGGGTCATCCGGGAGTTTACCGAAATCAAGCCTGATTTGGTGATCATTGATGTAC
AGCTGCCGAAATTTGACGGCTTTCATTGGTGCAGAATGATACGCTCCCAATCAAACGTGCCGATTCTCTTTTTGTCCTCG
CGCGATCATCCCGCGGATATGGTCATGTCGATGCAGCTCGGGGCAGATGATTTTATTCAGAAGCCTTTTCACTTTGATGT
GTTAATCGCGAAAATACAGGCGGTGTTCCGCCGTGTGCATCAATACGGCACAGAACCGGCGCTGATGAAAAGATGGTGCG
GAGCGGTCATTGACACAGAAACCAACACGGTCAGCCGTAAAAACGGTTCGGTCGAGCTGACCAAAAACGAAATGCTGATC
TTAAAACTGCTGGCTGAGCAGAAAAATAAAATCGTCAGCCGGGAAGAACTCATCAGAAGCCTATGGAATGATGAGCGTTT
CGTCAGTGATAATACGCTGACGGTGAATGTCAACCGGCTGCGGAAAAAACTCGATCAATTAGGCATCGGGAAAATGATTG
AAACCAAGGTGGGGCAGGGATACATCGCAAAGGAAGAAGACGGTCTTTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.639

94.805

0.385