Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NYE38_RS07220 Genome accession   NZ_CP151944
Coordinates   1390887..1391351 (-) Length   154 a.a.
NCBI ID   WP_014417605.1    Uniprot ID   I2C4C5
Organism   Bacillus sp. EU63     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1385887..1396351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE38_RS07200 (NYE38_07200) - 1386367..1388187 (+) 1821 WP_017417673.1 PAS domain-containing protein -
  NYE38_RS07205 (NYE38_07205) - 1388213..1389382 (-) 1170 WP_007611083.1 aminotransferase A -
  NYE38_RS07210 (NYE38_07210) - 1389583..1389744 (-) 162 WP_007409608.1 hypothetical protein -
  NYE38_RS07215 (NYE38_07215) cheV 1389933..1390844 (+) 912 WP_017417674.1 chemotaxis protein CheV -
  NYE38_RS07220 (NYE38_07220) kre 1390887..1391351 (-) 465 WP_014417605.1 YkyB family protein Regulator
  NYE38_RS07225 (NYE38_07225) - 1391474..1392766 (-) 1293 WP_326116773.1 MFS transporter -
  NYE38_RS07230 (NYE38_07230) - 1392842..1393336 (-) 495 WP_094296114.1 L,D-transpeptidase family protein -
  NYE38_RS07235 (NYE38_07235) - 1393411..1394274 (-) 864 WP_022553417.1 metallophosphoesterase -
  NYE38_RS07240 (NYE38_07240) fadH 1394418..1395182 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  NYE38_RS07245 (NYE38_07245) - 1395296..1395844 (+) 549 WP_017417677.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.60 Da        Isoelectric Point: 10.5497

>NTDB_id=981591 NYE38_RS07220 WP_014417605.1 1390887..1391351(-) (kre) [Bacillus sp. EU63]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=981591 NYE38_RS07220 WP_014417605.1 1390887..1391351(-) (kre) [Bacillus sp. EU63]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C4C5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment