Detailed information NTG0981571

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NYE38_RS01945
• Genome accession: NZ_CP151944
• Coordinates: 390140..391288 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus sp. EU63
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 385140..396288

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE38_RS01925 (NYE38_01925)	-	385540..386223 (-)	684	WP_063636994.1	ABC transporter ATP-binding protein	-
NYE38_RS01930 (NYE38_01930)	-	386238..387671 (-)	1434	WP_340801362.1	ABC transporter permease	-
NYE38_RS01935 (NYE38_01935)	-	387884..388567 (+)	684	WP_014416901.1	response regulator transcription factor	-
NYE38_RS01940 (NYE38_01940)	-	388554..389981 (+)	1428	WP_103527150.1	HAMP domain-containing sensor histidine kinase	-
NYE38_RS01945 (NYE38_01945)	rapC	390140..391288 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
NYE38_RS01950 (NYE38_01950)	phrC	391272..391391 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
NYE38_RS01955 (NYE38_01955)	-	391541..391636 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
NYE38_RS01960 (NYE38_01960)	-	391731..393095 (-)	1365	WP_053285479.1	aspartate kinase	-
NYE38_RS01965 (NYE38_01965)	ceuB	393508..394461 (+)	954	WP_014416904.1	ABC transporter permease	Machinery gene
NYE38_RS01970 (NYE38_01970)	-	394451..395398 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
NYE38_RS01975 (NYE38_01975)	-	395392..396150 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=981571 NYE38_RS01945 WP_003156336.1 390140..391288(+) (rapC) [Bacillus sp. EU63]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=981571 NYE38_RS01945 WP_003156336.1 390140..391288(+) (rapC) [Bacillus sp. EU63]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATATACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568