Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | ACNM7T_RS06540 | Genome accession | NZ_CP183041 |
| Coordinates | 1247214..1248350 (+) | Length | 378 a.a. |
| NCBI ID | WP_087920760.1 | Uniprot ID | A7Z3N2 |
| Organism | Bacillus amyloliquefaciens strain Scm | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1242214..1253350
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNM7T_RS06520 (ACNM7T_06520) | - | 1242663..1244108 (+) | 1446 | WP_076423943.1 | tagaturonate reductase | - |
| ACNM7T_RS06525 (ACNM7T_06525) | - | 1244105..1245598 (+) | 1494 | WP_015239669.1 | UxaA family hydrolase | - |
| ACNM7T_RS06530 (ACNM7T_06530) | - | 1245632..1246396 (-) | 765 | WP_020955677.1 | sulfite exporter TauE/SafE family protein | - |
| ACNM7T_RS06535 (ACNM7T_06535) | - | 1246541..1247008 (-) | 468 | WP_025284602.1 | DinB family protein | - |
| ACNM7T_RS06540 (ACNM7T_06540) | rapC | 1247214..1248350 (+) | 1137 | WP_087920760.1 | Rap family tetratricopeptide repeat protein | Regulator |
| ACNM7T_RS06545 (ACNM7T_06545) | - | 1248340..1248474 (+) | 135 | WP_003154881.1 | PhrA family phosphatase inhibitor | - |
| ACNM7T_RS06550 (ACNM7T_06550) | - | 1248617..1249570 (+) | 954 | WP_015417280.1 | N-acetylmuramoyl-L-alanine amidase | - |
| ACNM7T_RS06555 (ACNM7T_06555) | - | 1249608..1249985 (-) | 378 | WP_007610770.1 | PH domain-containing protein | - |
| ACNM7T_RS06560 (ACNM7T_06560) | - | 1250095..1250700 (+) | 606 | WP_047935636.1 | poly-gamma-glutamate hydrolase family protein | - |
| ACNM7T_RS06565 (ACNM7T_06565) | - | 1250819..1251409 (-) | 591 | WP_007610775.1 | ImmA/IrrE family metallo-endopeptidase | - |
| ACNM7T_RS06570 (ACNM7T_06570) | xre | 1251558..1251896 (-) | 339 | WP_003154871.1 | HTH-type transcriptional regulator Xre | - |
| ACNM7T_RS06575 (ACNM7T_06575) | - | 1252087..1252266 (+) | 180 | WP_007407285.1 | hypothetical protein | - |
| ACNM7T_RS06580 (ACNM7T_06580) | - | 1252256..1253083 (+) | 828 | WP_100001383.1 | phage portal protein | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 45073.28 Da Isoelectric Point: 4.9159
>NTDB_id=981546 ACNM7T_RS06540 WP_087920760.1 1247214..1248350(+) (rapC) [Bacillus amyloliquefaciens strain Scm]
MRMKQTIPSSFVGLKINEWYTHIRQFHVLEAERVKREVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPLKEDPSQPE
FSELLEDIEGNQYKLTGLLDYYFNFFRGMYEFKQKMFLNAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQSYETYNVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKQEGNPRLISSALYNLGNCYEKMGDLSK
AAEYFETSVSICRSEKFDNLPHSIYSLTQVLYKQNTTAEAEKQYRLGLSIAREYNDELFVNLFQFLHALYGKEMDNASVR
HTFDFLEEHMLYPYVEELAHDAAKFYMKHGQPEKALTFYEKMVHAQKQIQRGDCLYEI
MRMKQTIPSSFVGLKINEWYTHIRQFHVLEAERVKREVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPLKEDPSQPE
FSELLEDIEGNQYKLTGLLDYYFNFFRGMYEFKQKMFLNAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQSYETYNVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKQEGNPRLISSALYNLGNCYEKMGDLSK
AAEYFETSVSICRSEKFDNLPHSIYSLTQVLYKQNTTAEAEKQYRLGLSIAREYNDELFVNLFQFLHALYGKEMDNASVR
HTFDFLEEHMLYPYVEELAHDAAKFYMKHGQPEKALTFYEKMVHAQKQIQRGDCLYEI
Nucleotide
Download Length: 1137 bp
>NTDB_id=981546 ACNM7T_RS06540 WP_087920760.1 1247214..1248350(+) (rapC) [Bacillus amyloliquefaciens strain Scm]
TTGAGGATGAAGCAGACTATTCCGTCCTCTTTTGTCGGGCTCAAAATTAATGAATGGTATACCCATATCCGGCAGTTTCA
CGTCCTTGAGGCGGAGCGCGTCAAACGTGAAGTAGAGAGAGAGATCGAGGATATGGAAGAAGATCAGGATCTGCTGCTGT
ATTATTCATTAATGGAATTCAGACACCGTGTCATGCTGGATTACATCAAGCCCTTAAAGGAGGACCCTTCTCAGCCTGAG
TTTTCAGAATTATTGGAAGACATTGAAGGCAACCAGTATAAACTGACAGGACTGCTTGATTACTACTTTAATTTTTTTCG
AGGAATGTACGAATTTAAACAGAAAATGTTCCTAAACGCCATGATGTATTACAAACGGGCTGAAAAAAACCTTGCACTCG
TTTCTGATGACATCGAGAAAGCTGAGTTTGCTTTTAAAATGGCCGAGATATTTTACAACCTGAAACAAACCTACGTCTCC
ATGAGTTATGCCGTTCAAGCCCTTGAAACGTACCAATCGTATGAGACGTACAACGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGGAATTATGATGACATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTTGCTTTAGATCTTGCAAAAC
AAGAAGGCAATCCCCGTCTTATCAGTTCAGCCTTATATAATCTCGGAAACTGTTACGAAAAAATGGGAGACCTCTCTAAA
GCAGCCGAATATTTTGAGACATCCGTTTCCATTTGCAGGTCAGAAAAGTTCGATAATCTTCCGCATTCTATTTACTCATT
AACACAGGTTCTTTATAAACAGAACACTACAGCCGAAGCAGAGAAGCAATACCGCCTCGGGCTCAGTATCGCCCGCGAAT
ACAATGATGAATTGTTTGTGAATCTGTTCCAATTTTTACATGCGTTATACGGCAAGGAAATGGATAACGCATCCGTCAGG
CACACGTTTGATTTTCTGGAAGAACACATGCTGTATCCGTATGTGGAAGAATTGGCGCATGACGCTGCCAAATTTTACAT
GAAACACGGACAGCCTGAAAAAGCGCTCACGTTTTATGAAAAAATGGTGCACGCCCAAAAACAAATCCAGAGAGGAGATT
GTCTATATGAAATCTAA
TTGAGGATGAAGCAGACTATTCCGTCCTCTTTTGTCGGGCTCAAAATTAATGAATGGTATACCCATATCCGGCAGTTTCA
CGTCCTTGAGGCGGAGCGCGTCAAACGTGAAGTAGAGAGAGAGATCGAGGATATGGAAGAAGATCAGGATCTGCTGCTGT
ATTATTCATTAATGGAATTCAGACACCGTGTCATGCTGGATTACATCAAGCCCTTAAAGGAGGACCCTTCTCAGCCTGAG
TTTTCAGAATTATTGGAAGACATTGAAGGCAACCAGTATAAACTGACAGGACTGCTTGATTACTACTTTAATTTTTTTCG
AGGAATGTACGAATTTAAACAGAAAATGTTCCTAAACGCCATGATGTATTACAAACGGGCTGAAAAAAACCTTGCACTCG
TTTCTGATGACATCGAGAAAGCTGAGTTTGCTTTTAAAATGGCCGAGATATTTTACAACCTGAAACAAACCTACGTCTCC
ATGAGTTATGCCGTTCAAGCCCTTGAAACGTACCAATCGTATGAGACGTACAACGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGGAATTATGATGACATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTTGCTTTAGATCTTGCAAAAC
AAGAAGGCAATCCCCGTCTTATCAGTTCAGCCTTATATAATCTCGGAAACTGTTACGAAAAAATGGGAGACCTCTCTAAA
GCAGCCGAATATTTTGAGACATCCGTTTCCATTTGCAGGTCAGAAAAGTTCGATAATCTTCCGCATTCTATTTACTCATT
AACACAGGTTCTTTATAAACAGAACACTACAGCCGAAGCAGAGAAGCAATACCGCCTCGGGCTCAGTATCGCCCGCGAAT
ACAATGATGAATTGTTTGTGAATCTGTTCCAATTTTTACATGCGTTATACGGCAAGGAAATGGATAACGCATCCGTCAGG
CACACGTTTGATTTTCTGGAAGAACACATGCTGTATCCGTATGTGGAAGAATTGGCGCATGACGCTGCCAAATTTTACAT
GAAACACGGACAGCCTGAAAAAGCGCTCACGTTTTATGAAAAAATGGTGCACGCCCAAAAACAAATCCAGAGAGGAGATT
GTCTATATGAAATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
44.415 |
99.471 |
0.442 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
42.48 |
100 |
0.426 |