Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSS81_RS14730 Genome accession   NZ_CP151943
Coordinates   2982563..2983513 (+) Length   316 a.a.
NCBI ID   WP_342429434.1    Uniprot ID   -
Organism   Neobacillus sp. FSL H8-0543     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2977563..2988513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS81_RS14710 (NSS81_14710) - 2977912..2978532 (+) 621 WP_342429430.1 hypothetical protein -
  NSS81_RS14715 (NSS81_14715) - 2978631..2980364 (-) 1734 WP_342429431.1 ABC transporter ATP-binding protein -
  NSS81_RS14720 (NSS81_14720) - 2980565..2981476 (+) 912 WP_342429432.1 DUF4309 domain-containing protein -
  NSS81_RS14725 (NSS81_14725) - 2981821..2982300 (-) 480 WP_342429433.1 redoxin domain-containing protein -
  NSS81_RS14730 (NSS81_14730) ceuB 2982563..2983513 (+) 951 WP_342429434.1 ABC transporter permease Machinery gene
  NSS81_RS14735 (NSS81_14735) - 2983506..2984456 (+) 951 WP_342429435.1 iron chelate uptake ABC transporter family permease subunit -
  NSS81_RS14740 (NSS81_14740) - 2984453..2985214 (+) 762 WP_342429436.1 ABC transporter ATP-binding protein -
  NSS81_RS14745 (NSS81_14745) - 2985233..2986180 (+) 948 WP_342429437.1 siderophore ABC transporter substrate-binding protein -
  NSS81_RS14750 (NSS81_14750) - 2986297..2986782 (-) 486 WP_342429438.1 hypothetical protein -
  NSS81_RS14755 (NSS81_14755) - 2986938..2988494 (+) 1557 WP_342429439.1 FMN-binding glutamate synthase family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34852.04 Da        Isoelectric Point: 10.2165

>NTDB_id=981543 NSS81_RS14730 WP_342429434.1 2982563..2983513(+) (ceuB) [Neobacillus sp. FSL H8-0543]
MKKRYLLLGLLVLSATSLFVGVSSISPLDLFDFQSEETQIFLISRLPRLVAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANASMLEKMAVAFVFALAGTFLFMKILDRIKFKDAIFIPLVGLMFGNILSSVTTFFAYRADVI
QNMSAWLQGDFSMIMKGRYELLYISVPILIISYFYANRFTVAGMGEDFSRNLGLAYRRVVNIGLILVALVTTTVVLTVGI
IPFLGLIIPNIISIFKGDHLQKTLPHTALLGAIFLLICDILGRVLIFPYEISISLMVGVIGSGIFLYLLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=981543 NSS81_RS14730 WP_342429434.1 2982563..2983513(+) (ceuB) [Neobacillus sp. FSL H8-0543]
ATGAAAAAACGATACTTACTACTTGGGTTGCTTGTCTTGTCTGCTACTTCATTGTTTGTAGGCGTCAGCAGCATATCACC
TTTAGACTTATTTGATTTCCAATCAGAAGAAACGCAAATTTTCCTAATCAGCAGGCTTCCAAGGCTAGTCGCTATTTTAC
TGGCAGGAGCAGGGATGAGTATCGCTGGTTTGATTATGCAGCAGCTTAGCAGAAACAAATTTGTCTCACCGACGACGGCT
GGAACATTAGATGCTACACGTTTAGGGATCCTCGTTTCAATGCTATTGTTTGCAAATGCTTCGATGCTAGAGAAAATGGC
GGTTGCCTTTGTGTTTGCGCTTGCTGGAACATTTTTGTTTATGAAAATTCTTGACCGAATCAAATTTAAAGATGCAATCT
TCATTCCGCTTGTAGGTCTTATGTTTGGTAATATTTTGTCCTCGGTTACAACTTTTTTTGCTTATCGTGCCGATGTCATT
CAAAATATGTCCGCCTGGCTGCAAGGTGATTTTTCAATGATAATGAAGGGAAGGTATGAACTCCTTTATATAAGTGTTCC
GATATTAATCATCTCTTATTTCTATGCTAACCGTTTTACAGTGGCTGGAATGGGAGAGGACTTTTCAAGAAATCTTGGGC
TGGCCTACCGACGTGTCGTGAATATTGGTCTAATCTTAGTAGCGCTTGTTACGACAACGGTTGTATTAACAGTAGGGATT
ATCCCATTTCTTGGCTTAATCATTCCAAACATTATTTCGATTTTTAAAGGGGACCATTTACAAAAGACATTACCGCATAC
TGCGCTTTTAGGTGCTATATTCCTTCTGATTTGCGATATTTTAGGCCGGGTGCTTATTTTTCCATATGAGATTTCGATCA
GTCTCATGGTGGGTGTAATCGGAAGCGGAATTTTCTTATACTTACTTTTCAGGAGGAAGGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.42

97.152

0.519

Multiple sequence alignment