Detailed information NTG0981517

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACNM7T_RS02290
• Genome accession: NZ_CP183041
• Coordinates: 453819..454949 (+)
• Length: 376 a.a.
• NCBI ID: WP_039062639.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain Scm
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 448819..459949

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNM7T_RS02270 (ACNM7T_02270)	-	450766..451020 (+)	255	Protein_408	peptidoglycan-binding domain-containing protein	-
ACNM7T_RS02275 (ACNM7T_02275)	-	451440..452207 (+)	768	WP_080760371.1	YiiX/YebB-like N1pC/P60 family cysteine hydrolase	-
ACNM7T_RS02280 (ACNM7T_02280)	-	452270..453403 (+)	1134	WP_039062638.1	hypothetical protein	-
ACNM7T_RS02285 (ACNM7T_02285)	-	453479..453682 (+)	204	WP_228767510.1	DUF2651 family protein	-
ACNM7T_RS02290 (ACNM7T_02290)	rapC	453819..454949 (+)	1131	WP_039062639.1	Rap family tetratricopeptide repeat protein	Regulator
ACNM7T_RS02295 (ACNM7T_02295)	-	454949..455083 (+)	135	WP_254922222.1	hypothetical protein	-
ACNM7T_RS02300 (ACNM7T_02300)	-	455443..455673 (-)	231	WP_039062640.1	hypothetical protein	-
ACNM7T_RS02305 (ACNM7T_02305)	-	456054..456611 (-)	558	WP_094031513.1	hypothetical protein	-
ACNM7T_RS02310 (ACNM7T_02310)	-	456707..457285 (-)	579	WP_169510081.1	hypothetical protein	-
ACNM7T_RS02315 (ACNM7T_02315)	-	457511..457777 (-)	267	WP_014416946.1	hypothetical protein	-
ACNM7T_RS02320 (ACNM7T_02320)	-	457883..459160 (-)	1278	WP_094032124.1	Nramp family divalent metal transporter	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44739.21 Da
• Isoelectric Point: 5.5626

>NTDB_id=981517 ACNM7T_RS02290 WP_039062639.1 453819..454949(+) (rapC) [Bacillus amyloliquefaciens strain Scm]
MDQVLPSSQVGVKINEWYKMIRQFSVPDAEILKAEVEQEIEEMEEDQDLLVFYSLMCFRHQLMLDSLEPEDRYRDRPTVD
ELLEKIEKPQKRLTGLLKYYSLFFRGMYEFDHKEYVEAISYYRKAERELNAVSDEMEQAEFHYKIADAYYQIDQHFVSLN
HLKKAKQLFEKSQLYKVKVIGCNMMVGANMYDMYRLTEAESYYREALSIARGLDEEKVKRIIGVIFHNLGLVYLRGKNLI
AAEENFKKAIDVKEHIDTVYGVRSLYMMANVLYQCDKAKEARFFYETALNRARTSNEEEYLAKLKIINSLYEEYNETEVK
QSLGYLEKKRLWSDFAELTEKLGDFHFEKRNYVEGRNFLKKTIHAQTQILKVTEAI

Nucleotide

• Length: 1131 bp

>NTDB_id=981517 ACNM7T_RS02290 WP_039062639.1 453819..454949(+) (rapC) [Bacillus amyloliquefaciens strain Scm]
GTGGACCAAGTTTTACCGTCGTCCCAAGTTGGTGTCAAGATCAATGAATGGTACAAAATGATTCGCCAGTTCAGTGTGCC
TGATGCTGAGATTTTAAAGGCTGAAGTAGAACAGGAAATAGAGGAGATGGAAGAGGATCAGGATTTGCTTGTCTTTTATT
CATTGATGTGCTTTCGTCACCAATTGATGTTAGATTCCTTGGAGCCGGAAGACAGATATAGAGATCGCCCTACAGTCGAC
GAACTGCTTGAAAAAATAGAAAAACCACAAAAAAGACTTACAGGCCTCTTGAAATATTACTCATTGTTTTTTCGTGGAAT
GTATGAATTTGATCATAAAGAGTATGTTGAAGCGATAAGCTATTATCGCAAAGCAGAGAGAGAGTTGAATGCTGTATCAG
ATGAAATGGAGCAAGCTGAATTTCATTACAAAATAGCTGATGCCTATTATCAAATTGATCAGCACTTTGTTTCCCTCAAT
CATTTAAAAAAAGCCAAGCAATTGTTTGAAAAAAGTCAACTATACAAAGTGAAAGTGATTGGCTGTAATATGATGGTCGG
TGCTAACATGTACGATATGTACAGGCTGACGGAGGCAGAATCATATTATCGGGAAGCATTAAGTATCGCCCGTGGCTTGG
ATGAGGAAAAAGTGAAAAGAATTATCGGAGTGATCTTTCATAACTTAGGCTTAGTTTATTTAAGAGGGAAAAATTTGATT
GCTGCTGAAGAGAATTTCAAAAAGGCAATAGACGTGAAAGAACATATTGATACAGTGTATGGAGTGAGATCATTATATAT
GATGGCGAATGTCCTGTACCAATGTGATAAAGCCAAGGAAGCACGTTTCTTTTATGAAACGGCTCTAAATCGTGCTCGGA
CTTCTAATGAAGAAGAATATTTAGCTAAATTAAAAATCATTAATTCATTATACGAAGAATATAATGAAACAGAAGTGAAA
CAAAGCTTAGGTTACTTGGAAAAGAAACGCCTTTGGTCTGATTTCGCAGAGCTAACCGAAAAATTAGGTGACTTTCATTT
TGAGAAGAGAAACTATGTAGAGGGAAGAAACTTTTTAAAGAAAACCATACATGCCCAAACACAAATACTTAAGGTTACGG
AGGCTATATAA

Domains

Predicted by InterProScan.

• MalT-like TPR region (TPR_MalT) (145-296)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.534	99.202	0.372