Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSS81_RS04245 | Genome accession | NZ_CP151943 |
| Coordinates | 798272..799324 (-) | Length | 350 a.a. |
| NCBI ID | WP_342432304.1 | Uniprot ID | - |
| Organism | Neobacillus sp. FSL H8-0543 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 793272..804324
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSS81_RS04205 (NSS81_04205) | - | 794010..794801 (+) | 792 | WP_342432297.1 | YqhG family protein | - |
| NSS81_RS04210 (NSS81_04210) | - | 795107..795292 (-) | 186 | WP_342432298.1 | YqzE family protein | - |
| NSS81_RS04215 (NSS81_04215) | comGG | 795364..795747 (-) | 384 | WP_342432299.1 | competence type IV pilus minor pilin ComGG | - |
| NSS81_RS04220 (NSS81_04220) | comGF | 795751..796209 (-) | 459 | WP_342433928.1 | competence type IV pilus minor pilin ComGF | - |
| NSS81_RS04225 (NSS81_04225) | comGE | 796166..796504 (-) | 339 | WP_342432300.1 | competence type IV pilus minor pilin ComGE | - |
| NSS81_RS04230 (NSS81_04230) | comGD | 796488..796928 (-) | 441 | WP_342432301.1 | competence type IV pilus minor pilin ComGD | - |
| NSS81_RS04235 (NSS81_04235) | comGC | 796928..797233 (-) | 306 | WP_342432302.1 | competence type IV pilus major pilin ComGC | - |
| NSS81_RS04240 (NSS81_04240) | comGB | 797254..798285 (-) | 1032 | WP_342432303.1 | competence type IV pilus assembly protein ComGB | - |
| NSS81_RS04245 (NSS81_04245) | comGA | 798272..799324 (-) | 1053 | WP_342432304.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSS81_RS04250 (NSS81_04250) | - | 799640..800335 (+) | 696 | WP_342432305.1 | helix-turn-helix domain-containing protein | - |
| NSS81_RS04255 (NSS81_04255) | - | 800419..800664 (+) | 246 | WP_342432306.1 | DUF2626 domain-containing protein | - |
| NSS81_RS04260 (NSS81_04260) | - | 800718..801809 (-) | 1092 | WP_342432307.1 | SAM-dependent methyltransferase | - |
| NSS81_RS04265 (NSS81_04265) | - | 801823..802458 (-) | 636 | WP_342432308.1 | MBL fold metallo-hydrolase | - |
| NSS81_RS04270 (NSS81_04270) | - | 802649..802822 (+) | 174 | WP_342432309.1 | DUF2759 domain-containing protein | - |
| NSS81_RS04275 (NSS81_04275) | - | 802860..804005 (-) | 1146 | WP_342432310.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39140.29 Da Isoelectric Point: 8.4791
>NTDB_id=981515 NSS81_RS04245 WP_342432304.1 798272..799324(-) (comGA) [Neobacillus sp. FSL H8-0543]
MANRIITDAARNQATDIHIVPRKDDTLVQIRLTNKLIPRLSLPKDECDRLISHFKFTANMDIGERRRPQSGAIFCEVGGQ
LMGLRLSTLPSNNRESLVIRLLPQQEQIPFHQLSLFPGMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYSLLNETAHLFH
RNVITLEDPIEKNYDSVLQIQVNEKAGVTYAAGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLVLSTMHTRDAKG
AVHRLHEFGVNWLEVEQTLIAVAAQRLVELTCPYCEGECSPYCYSFGSWKRASVFELLAGRNLNAAMKAAKGEDVISQYR
TIKEVIKKGIALGYIKEAEFERLVYDHEAP
MANRIITDAARNQATDIHIVPRKDDTLVQIRLTNKLIPRLSLPKDECDRLISHFKFTANMDIGERRRPQSGAIFCEVGGQ
LMGLRLSTLPSNNRESLVIRLLPQQEQIPFHQLSLFPGMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYSLLNETAHLFH
RNVITLEDPIEKNYDSVLQIQVNEKAGVTYAAGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLVLSTMHTRDAKG
AVHRLHEFGVNWLEVEQTLIAVAAQRLVELTCPYCEGECSPYCYSFGSWKRASVFELLAGRNLNAAMKAAKGEDVISQYR
TIKEVIKKGIALGYIKEAEFERLVYDHEAP
Nucleotide
Download Length: 1053 bp
>NTDB_id=981515 NSS81_RS04245 WP_342432304.1 798272..799324(-) (comGA) [Neobacillus sp. FSL H8-0543]
TTGGCCAATCGGATTATAACAGATGCCGCGAGGAACCAGGCAACTGATATCCACATTGTTCCCAGAAAGGATGATACACT
CGTACAGATTCGCCTAACGAACAAACTTATCCCCCGACTATCCCTACCAAAGGATGAATGCGACAGATTAATTTCACATT
TTAAATTCACTGCAAATATGGATATCGGAGAACGAAGACGCCCGCAGAGTGGTGCGATATTTTGTGAAGTTGGAGGCCAA
TTAATGGGTCTAAGACTTTCAACCCTCCCCTCAAACAACAGAGAAAGTCTAGTGATAAGACTTTTACCACAACAAGAACA
GATTCCTTTTCATCAACTCTCACTGTTTCCAGGTATGACAAGAAAATTATTAGCACTCCTTAAACACGCCCACGGGTTAA
TTATATTTACCGGGCCGACTGGCAGTGGCAAAACAACCACATTATATTCCCTTTTGAACGAAACTGCCCACCTATTTCAC
CGAAATGTTATTACACTCGAAGACCCCATTGAAAAAAATTATGATTCTGTTTTACAAATACAAGTGAATGAAAAGGCAGG
AGTTACCTATGCAGCGGGCTTAAAGGCCATTCTGCGTCATGATCCCGACATTATTATGGTAGGGGAAATTCGTGATGCTG
AAACAGCTAAAATTGCTGTCCGTGCAGCCTTAACAGGCCATTTAGTGCTTAGCACTATGCATACCCGTGACGCGAAAGGT
GCGGTTCATCGTCTTCATGAATTTGGGGTGAATTGGTTAGAGGTGGAGCAAACGTTAATTGCAGTAGCGGCCCAAAGATT
AGTTGAATTAACCTGTCCATATTGTGAGGGAGAGTGCTCTCCCTACTGTTATTCCTTTGGCAGCTGGAAAAGGGCAAGTG
TATTTGAGCTTTTAGCAGGAAGAAACTTAAACGCCGCAATGAAAGCAGCAAAAGGGGAAGATGTTATCTCGCAATACCGA
ACAATTAAGGAAGTAATAAAAAAAGGCATCGCTCTCGGATACATCAAAGAAGCTGAATTTGAGCGTCTGGTATATGATCA
TGAGGCGCCATAA
TTGGCCAATCGGATTATAACAGATGCCGCGAGGAACCAGGCAACTGATATCCACATTGTTCCCAGAAAGGATGATACACT
CGTACAGATTCGCCTAACGAACAAACTTATCCCCCGACTATCCCTACCAAAGGATGAATGCGACAGATTAATTTCACATT
TTAAATTCACTGCAAATATGGATATCGGAGAACGAAGACGCCCGCAGAGTGGTGCGATATTTTGTGAAGTTGGAGGCCAA
TTAATGGGTCTAAGACTTTCAACCCTCCCCTCAAACAACAGAGAAAGTCTAGTGATAAGACTTTTACCACAACAAGAACA
GATTCCTTTTCATCAACTCTCACTGTTTCCAGGTATGACAAGAAAATTATTAGCACTCCTTAAACACGCCCACGGGTTAA
TTATATTTACCGGGCCGACTGGCAGTGGCAAAACAACCACATTATATTCCCTTTTGAACGAAACTGCCCACCTATTTCAC
CGAAATGTTATTACACTCGAAGACCCCATTGAAAAAAATTATGATTCTGTTTTACAAATACAAGTGAATGAAAAGGCAGG
AGTTACCTATGCAGCGGGCTTAAAGGCCATTCTGCGTCATGATCCCGACATTATTATGGTAGGGGAAATTCGTGATGCTG
AAACAGCTAAAATTGCTGTCCGTGCAGCCTTAACAGGCCATTTAGTGCTTAGCACTATGCATACCCGTGACGCGAAAGGT
GCGGTTCATCGTCTTCATGAATTTGGGGTGAATTGGTTAGAGGTGGAGCAAACGTTAATTGCAGTAGCGGCCCAAAGATT
AGTTGAATTAACCTGTCCATATTGTGAGGGAGAGTGCTCTCCCTACTGTTATTCCTTTGGCAGCTGGAAAAGGGCAAGTG
TATTTGAGCTTTTAGCAGGAAGAAACTTAAACGCCGCAATGAAAGCAGCAAAAGGGGAAGATGTTATCTCGCAATACCGA
ACAATTAAGGAAGTAATAAAAAAAGGCATCGCTCTCGGATACATCAAAGAAGCTGAATTTGAGCGTCTGGTATATGATCA
TGAGGCGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.734 |
99.714 |
0.566 |
| pilB | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
36.915 |
100 |
0.383 |
| pilB | Glaesserella parasuis strain SC1401 |
39.881 |
96 |
0.383 |