Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NSU09_RS07915 Genome accession   NZ_CP151942
Coordinates   1487517..1487981 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus sp. PS194     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1482517..1492981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU09_RS07895 (NSU09_07895) kinA 1482984..1484804 (+) 1821 WP_342411227.1 sporulation histidine kinase KinA -
  NSU09_RS07900 (NSU09_07900) - 1484814..1485995 (-) 1182 WP_014476653.1 aminotransferase A -
  NSU09_RS07905 (NSU09_07905) - 1486197..1486358 (-) 162 WP_003245246.1 hypothetical protein -
  NSU09_RS07910 (NSU09_07910) cheV 1486562..1487473 (+) 912 WP_029727006.1 chemotaxis protein CheV -
  NSU09_RS07915 (NSU09_07915) kre 1487517..1487981 (-) 465 WP_003232406.1 YkyB family protein Regulator
  NSU09_RS07920 (NSU09_07920) - 1488107..1489399 (-) 1293 WP_029727007.1 MFS transporter -
  NSU09_RS07925 (NSU09_07925) - 1489475..1489969 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  NSU09_RS07930 (NSU09_07930) - 1490021..1490884 (-) 864 WP_029727008.1 metallophosphoesterase -
  NSU09_RS07935 (NSU09_07935) fadH 1491027..1491791 (+) 765 WP_029727009.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=981463 NSU09_RS07915 WP_003232406.1 1487517..1487981(-) (kre) [Bacillus sp. PS194]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=981463 NSU09_RS07915 WP_003232406.1 1487517..1487981(-) (kre) [Bacillus sp. PS194]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment