Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV/pilI   Type   Regulator
Locus tag   ACNR0F_RS03085 Genome accession   NZ_CP183037
Coordinates   579416..580030 (+) Length   204 a.a.
NCBI ID   WP_003790053.1    Uniprot ID   -
Organism   Kingella kingae strain URMC_2412A945     
Function   repress natural transformation; antagonize ComP (predicted from homology)   
Competence regulation

Genomic Context

Location: 574416..585030
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR0F_RS03060 (ACNR0F_03060) - 574604..575263 (-) 660 WP_032827637.1 MotA/TolQ/ExbB proton channel family protein -
  ACNR0F_RS03065 (ACNR0F_03065) - 575325..576254 (-) 930 WP_038310943.1 energy transducer TonB -
  ACNR0F_RS03070 (ACNR0F_03070) - 576567..577097 (+) 531 WP_003786039.1 inorganic diphosphatase -
  ACNR0F_RS03075 (ACNR0F_03075) dnaB 577227..578636 (+) 1410 WP_003790051.1 replicative DNA helicase -
  ACNR0F_RS03080 (ACNR0F_03080) - 578670..579389 (+) 720 WP_038310941.1 GspH/FimT family pseudopilin -
  ACNR0F_RS03085 (ACNR0F_03085) pilV/pilI 579416..580030 (+) 615 WP_003790053.1 type IV pilus modification protein PilV Regulator
  ACNR0F_RS03090 (ACNR0F_03090) - 580051..581115 (+) 1065 WP_038310939.1 PilW family protein -
  ACNR0F_RS03095 (ACNR0F_03095) - 581149..581757 (+) 609 WP_003786044.1 pilus assembly PilX family protein -
  ACNR0F_RS03100 (ACNR0F_03100) - 581764..582249 (+) 486 WP_418605072.1 type IV pilin protein -
  ACNR0F_RS03105 (ACNR0F_03105) - 582373..584037 (+) 1665 WP_038310935.1 AMP-binding protein -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22274.47 Da        Isoelectric Point: 8.4163

>NTDB_id=981460 ACNR0F_RS03085 WP_003790053.1 579416..580030(+) (pilV/pilI) [Kingella kingae strain URMC_2412A945]
MKNMTYFHTKYSMKGATLLEVMISVLLLTFGILALMAAQLRSVASISEAENRSIVSQAAEALAEGMQMNAVLTKNGTTYR
RRYSNYVPKSRPLYPGSAVTAPTSLNRTNITKVELAAQHLAEFEYVLSTQLPNVSVLAYAICLDKPDATPPVLGDGGALT
DNCAPNNNEHNTNMIKIAWRMGNANGTDKNQQSTTYTYMLEVGN

Nucleotide


Download         Length: 615 bp        

>NTDB_id=981460 ACNR0F_RS03085 WP_003790053.1 579416..580030(+) (pilV/pilI) [Kingella kingae strain URMC_2412A945]
ATGAAAAATATGACTTATTTTCATACTAAATATTCAATGAAAGGTGCAACACTACTGGAAGTGATGATTTCCGTGTTGTT
GCTGACCTTTGGTATTTTGGCATTGATGGCGGCGCAGTTGCGTTCTGTTGCAAGCATTAGTGAAGCGGAAAATCGCAGTA
TTGTGTCGCAGGCTGCAGAAGCGTTAGCAGAAGGCATGCAAATGAATGCAGTTCTGACTAAAAATGGAACGACTTATCGT
CGTCGTTATTCTAATTATGTGCCAAAGAGTAGGCCATTGTATCCAGGCAGCGCAGTCACAGCTCCTACTTCTTTGAACAG
AACAAATATTACAAAAGTAGAGCTGGCAGCACAACATTTAGCTGAATTTGAATATGTTTTGAGTACTCAATTACCGAATG
TATCTGTGCTTGCATATGCGATTTGTTTAGATAAACCAGATGCAACCCCCCCTGTTTTGGGTGATGGCGGGGCATTGACC
GATAATTGTGCACCAAACAATAATGAGCATAACACCAATATGATTAAGATTGCATGGCGCATGGGTAATGCCAATGGAAC
GGACAAGAATCAACAATCTACTACTTATACCTATATGCTAGAAGTAGGCAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV/pilI Neisseria gonorrhoeae MS11

34.722

100

0.368