Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSU09_RS02165 Genome accession   NZ_CP151942
Coordinates   425467..426417 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus sp. PS194     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 420467..431417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU09_RS02140 (NSU09_02140) rapC 421926..423074 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  NSU09_RS02145 (NSU09_02145) phrC 423058..423180 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  NSU09_RS02150 (NSU09_02150) - 423280..423369 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  NSU09_RS02155 (NSU09_02155) - 423451..423564 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  NSU09_RS02160 (NSU09_02160) - 423718..425082 (-) 1365 WP_113713033.1 aspartate kinase -
  NSU09_RS02165 (NSU09_02165) ceuB 425467..426417 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  NSU09_RS02170 (NSU09_02170) yclO 426410..427357 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  NSU09_RS02175 (NSU09_02175) yclP 427351..428109 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  NSU09_RS02180 (NSU09_02180) yclQ 428131..429084 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  NSU09_RS02185 (NSU09_02185) - 429314..430246 (+) 933 WP_014478835.1 restriction endonuclease -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=981444 NSU09_RS02165 WP_014475804.1 425467..426417(+) (ceuB) [Bacillus sp. PS194]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=981444 NSU09_RS02165 WP_014475804.1 425467..426417(+) (ceuB) [Bacillus sp. PS194]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment