Detailed information NTG0981414

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AAFX31_RS14310
• Genome accession: NZ_CP151941
• Coordinates: 1329787..1330791 (+)
• Length: 334 a.a.
• NCBI ID: WP_008219665.1
• Uniprot ID: A0A7Y4DT14
• Organism: Vibrio chagasii strain TBV018
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1324787..1335791

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFX31_RS14295 (AAFX31_14305)	-	1325172..1326461 (-)	1290	WP_008219668.1	malic enzyme-like NAD(P)-binding protein	-
AAFX31_RS14300 (AAFX31_14310)	rpmE	1326795..1327013 (-)	219	WP_004737142.1	50S ribosomal protein L31	-
AAFX31_RS14305 (AAFX31_14315)	priA	1327345..1329546 (+)	2202	WP_061033611.1	primosomal protein N'	-
AAFX31_RS14310 (AAFX31_14320)	cytR	1329787..1330791 (+)	1005	WP_008219665.1	DNA-binding transcriptional regulator CytR	Regulator
AAFX31_RS14315 (AAFX31_14325)	ftsN	1330914..1331453 (+)	540	WP_032498450.1	cell division protein FtsN	-
AAFX31_RS14320 (AAFX31_14330)	hslV	1331655..1332203 (+)	549	WP_004737138.1	ATP-dependent protease subunit HslV	-
AAFX31_RS14325 (AAFX31_14335)	hslU	1332259..1333599 (+)	1341	WP_137406913.1	HslU--HslV peptidase ATPase subunit	-
AAFX31_RS14330 (AAFX31_14340)	-	1333789..1334706 (+)	918	WP_239962837.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AAFX31_RS14335 (AAFX31_14345)	rraA	1334780..1335298 (+)	519	WP_004737135.1	ribonuclease E activity regulator RraA	-
AAFX31_RS14340 (AAFX31_14350)	zapB	1335394..1335636 (-)	243	WP_008219652.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.98 Da
• Isoelectric Point: 6.1357

>NTDB_id=981414 AAFX31_RS14310 WP_008219665.1 1329787..1330791(+) (cytR) [Vibrio chagasii strain TBV018]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVETAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKSEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPMSATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
ASLVVRGSTAPPRM

Nucleotide

• Length: 1005 bp

>NTDB_id=981414 AAFX31_RS14310 WP_008219665.1 1329787..1330791(+) (cytR) [Vibrio chagasii strain TBV018]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACGGCTACCGTATCACGAGCTTTGATGAATCCTGAGAA
AGTCTCAGTTTCGACTCGCAAACGAGTGGAAACAGCCGTACTTGAAGCTGGATACTCACCTAATACATTAGCTAGAAATT
TACGTCGCAACGAATCAAAAACCATCATTACTATCGTTCCTGATATCTGTGACCCGTATTTCGCGGAAATCATTCGTGGT
ATCGAAGATGCTGCTGTCGAAAATGATTACCTTGTTCTACTGGGTGACAGCGGTCAACAGAAGAAACGTGAGTCTTCGTT
TGTTAATCTCGTCTTCACCAAACAAGCGGACGGCATGCTACTACTAGGCACCGACCACCCATTCGATGTCAGTAAGTCTG
AACAAAAGAACCTGCCTCCTATGGTAATGGCATGTGAGTTCGCGCCAGAACTTGAACTGCCTACTGTACACATCGATAAC
CTGACTTCTGCATTCGAAGCCGTGAACTACCTTGCTCAATTGGGTCATAAGCGTATCGCTCAAATCTCCGGCCCAATGTC
AGCAACCCTATGTAAGTTCCGTCAGCAAGGTTACCAACAAGCGCTGCGCCGTGCGGGCGTGTCAATGAACCCAGCCTACA
GCACCGTCGGTGATTTTACCTTCGAAGCGGGAGCTCAAGCGGTTCGTCAACTGTTAGCGCTACCAGAGCAGCCAACCGCT
ATCTTCTGCCATAACGATGCAATGGCCATTGGTGCGATTCAAGAAGCGAAAAAACTCGGCTTACGAGTGCCTCAAGATCT
ATCCGTTGTTGGCTTTGATGATATCCAATTCGCGCAATACTGCGATCCACCGCTAACCACCATTTCTCAACCTCGTTATG
AGATTGGGCGCCAAGCAATGTTGATGATGCTAGACCTACTAAAAGGCAACGATGTGCAAGCAGGTTCGCGTCTACTAGAA
GCCAGCTTAGTGGTTCGAGGCAGTACTGCACCACCTCGAATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

3D structure

• AlphaFold DB: A0A7Y4DT14

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.458	99.401	0.889
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.701	0.871