Detailed information NTG0981305

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AAFX34_RS09530
• Genome accession: NZ_CP151937
• Coordinates: 411462..412469 (-)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain TBV029
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 406462..417469

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFX34_RS09500 (AAFX34_09490)	zapB	406587..406829 (-)	243	WP_011079328.1	cell division protein ZapB	-
AAFX34_RS09505 (AAFX34_09495)	rraA	407051..407572 (-)	522	WP_011079329.1	ribonuclease E activity regulator RraA	-
AAFX34_RS09510 (AAFX34_09500)	-	407648..408565 (-)	918	WP_011079330.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AAFX34_RS09515 (AAFX34_09505)	hslU	408731..410062 (-)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
AAFX34_RS09520 (AAFX34_09510)	hslV	410090..410644 (-)	555	WP_011079332.1	ATP-dependent protease subunit HslV	-
AAFX34_RS09525 (AAFX34_09515)	-	410795..411352 (-)	558	WP_011151294.1	SPOR domain-containing protein	-
AAFX34_RS09530 (AAFX34_09520)	cytR	411462..412469 (-)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
AAFX34_RS09535 (AAFX34_09525)	priA	412698..414902 (-)	2205	WP_061058956.1	primosomal protein N'	-
AAFX34_RS09540 (AAFX34_09530)	rpmE	415183..415404 (+)	222	WP_011151292.1	50S ribosomal protein L31	-
AAFX34_RS09545 (AAFX34_09535)	-	415682..416959 (+)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
AAFX34_RS09550 (AAFX34_09540)	metJ	417046..417363 (-)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=981305 AAFX34_RS09530 WP_011079334.1 411462..412469(-) (cytR) [Vibrio vulnificus strain TBV029]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=981305 AAFX34_RS09530 WP_011079334.1 411462..412469(-) (cytR) [Vibrio vulnificus strain TBV029]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCAGTGTTGGAAGCTGGTTATTCCCCAAACTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTGTTGCTCGGTACCGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCGCAAGATCT
GTCGATTGTCGGCTTCGATGACATTCAGTTTGCCCAATATTGCGATCCTCCACTAACCACCATCTCACAGCCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGACATGACATTCACAGTGGCTCACGCTTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCAGGCTTGCGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875