Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   WFZ83_RS18105 Genome accession   NZ_CP151867
Coordinates   3458312..3458488 (-) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus thuringiensis strain YB6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3453312..3463488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WFZ83_RS18085 - 3453934..3454680 (-) 747 WP_000966134.1 YjbA family protein -
  WFZ83_RS18090 - 3454824..3455612 (-) 789 WP_342377722.1 DUF2268 domain-containing putative Zn-dependent protease -
  WFZ83_RS18095 fabF 3455719..3456957 (-) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  WFZ83_RS18100 fabH 3456989..3457921 (-) 933 WP_001100539.1 beta-ketoacyl-ACP synthase III -
  WFZ83_RS18105 comZ 3458312..3458488 (-) 177 WP_009879752.1 ComZ family protein Regulator
  WFZ83_RS18110 - 3458542..3459414 (-) 873 WP_342377726.1 NAD(P)-dependent oxidoreductase -
  WFZ83_RS18115 - 3459444..3460178 (-) 735 WP_342377728.1 alpha/beta hydrolase -
  WFZ83_RS18120 - 3460335..3460517 (+) 183 WP_001211116.1 YjzD family protein -
  WFZ83_RS18125 clpB 3460551..3463151 (-) 2601 WP_000365416.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=981152 WFZ83_RS18105 WP_009879752.1 3458312..3458488(-) (comZ) [Bacillus thuringiensis strain YB6]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=981152 WFZ83_RS18105 WP_009879752.1 3458312..3458488(-) (comZ) [Bacillus thuringiensis strain YB6]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment