Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   WFZ83_RS18020 Genome accession   NZ_CP151867
Coordinates   3439206..3439889 (-) Length   227 a.a.
NCBI ID   WP_000350710.1    Uniprot ID   Q81TR3
Organism   Bacillus thuringiensis strain YB6     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 3434206..3444889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WFZ83_RS18005 pepF 3434387..3436213 (-) 1827 WP_000003393.1 oligoendopeptidase F Regulator
  WFZ83_RS18010 - 3436264..3437508 (-) 1245 WP_087931424.1 competence protein CoiA family protein -
  WFZ83_RS18015 - 3437589..3439133 (-) 1545 WP_000799201.1 cardiolipin synthase -
  WFZ83_RS18020 mecA 3439206..3439889 (-) 684 WP_000350710.1 adaptor protein MecA Regulator
  WFZ83_RS18025 - 3440216..3440890 (+) 675 WP_000362618.1 TerC family protein -
  WFZ83_RS18030 spx 3440940..3441335 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  WFZ83_RS18035 - 3441929..3442132 (+) 204 WP_000559980.1 hypothetical protein -
  WFZ83_RS18040 - 3442161..3443807 (-) 1647 WP_000727257.1 peptide ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26966.00 Da        Isoelectric Point: 3.9822

>NTDB_id=981149 WFZ83_RS18020 WP_000350710.1 3439206..3439889(-) (mecA) [Bacillus thuringiensis strain YB6]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=981149 WFZ83_RS18020 WP_000350710.1 3439206..3439889(-) (mecA) [Bacillus thuringiensis strain YB6]
TTGGATATTGAAAGAATTAATGATCATACGATGAAGTTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGCAGGAACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAGGAAGAAATTGATCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q81TR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment