Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AAB109_RS22920 | Genome accession | NZ_CP151780 |
| Coordinates | 4384807..4385859 (-) | Length | 350 a.a. |
| NCBI ID | WP_013085018.1 | Uniprot ID | D5DMH8 |
| Organism | Priestia megaterium strain IMGN6 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4379807..4390859
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAB109_RS22880 (AAB109_22880) | - | 4380822..4381646 (+) | 825 | WP_013059169.1 | YqhG family protein | - |
| AAB109_RS22885 (AAB109_22885) | - | 4381671..4381856 (-) | 186 | WP_013059170.1 | YqzE family protein | - |
| AAB109_RS22890 (AAB109_22890) | comGG | 4381900..4382274 (-) | 375 | WP_043976241.1 | competence type IV pilus minor pilin ComGG | - |
| AAB109_RS22895 (AAB109_22895) | comGF | 4382264..4382701 (-) | 438 | WP_043976239.1 | competence type IV pilus minor pilin ComGF | - |
| AAB109_RS22900 (AAB109_22900) | - | 4382698..4383036 (-) | 339 | WP_028410645.1 | type II secretion system protein | - |
| AAB109_RS22905 (AAB109_22905) | comGD | 4383020..4383502 (-) | 483 | WP_322552428.1 | competence type IV pilus minor pilin ComGD | - |
| AAB109_RS22910 (AAB109_22910) | comGC | 4383444..4383755 (-) | 312 | WP_322552429.1 | competence type IV pilus major pilin ComGC | - |
| AAB109_RS22915 (AAB109_22915) | comGB | 4383770..4384816 (-) | 1047 | WP_097824594.1 | competence type IV pilus assembly protein ComGB | - |
| AAB109_RS22920 (AAB109_22920) | comGA | 4384807..4385859 (-) | 1053 | WP_013085018.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AAB109_RS22925 (AAB109_22925) | - | 4386129..4386512 (-) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| AAB109_RS22930 (AAB109_22930) | - | 4386775..4387011 (+) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| AAB109_RS22935 (AAB109_22935) | - | 4387049..4387681 (-) | 633 | WP_034648929.1 | MBL fold metallo-hydrolase | - |
| AAB109_RS22940 (AAB109_22940) | - | 4387890..4388066 (+) | 177 | WP_013059181.1 | DUF2759 domain-containing protein | - |
| AAB109_RS22945 (AAB109_22945) | - | 4388102..4389004 (-) | 903 | WP_043976229.1 | M14 family metallocarboxypeptidase | - |
| AAB109_RS22950 (AAB109_22950) | - | 4389116..4390084 (-) | 969 | WP_013059183.1 | ROK family glucokinase | - |
| AAB109_RS22955 (AAB109_22955) | - | 4390087..4390293 (-) | 207 | WP_013059184.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39671.03 Da Isoelectric Point: 9.1859
>NTDB_id=980865 AAB109_RS22920 WP_013085018.1 4384807..4385859(-) (comGA) [Priestia megaterium strain IMGN6]
MTEIEQFATYVIRDAYECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYVIRDAYECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=980865 AAB109_RS22920 WP_013085018.1 4384807..4385859(-) (comGA) [Priestia megaterium strain IMGN6]
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATATGAGTGCCGAAGTTCTGATGTGCATATTGTACC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACG
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACTGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGAATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACAATGCAT
ACTAAAGATACAAAAGGGTCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGATAA
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATATGAGTGCCGAAGTTCTGATGTGCATATTGTACC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACG
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACTGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGAATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACAATGCAT
ACTAAAGATACAAAAGGGTCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.857 |
100 |
0.589 |