Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | AAB109_RS16910 | Genome accession | NZ_CP151780 |
| Coordinates | 3284140..3284562 (+) | Length | 140 a.a. |
| NCBI ID | WP_013057949.1 | Uniprot ID | A0A8D3X0F8 |
| Organism | Priestia megaterium strain IMGN6 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 3279140..3289562
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAB109_RS16885 (AAB109_16885) | - | 3279472..3280305 (-) | 834 | WP_322552254.1 | AraC family transcriptional regulator | - |
| AAB109_RS16890 (AAB109_16890) | - | 3280528..3281349 (+) | 822 | WP_074895082.1 | histidine kinase | - |
| AAB109_RS16895 (AAB109_16895) | - | 3281350..3281991 (+) | 642 | WP_098248051.1 | response regulator transcription factor | - |
| AAB109_RS16900 (AAB109_16900) | - | 3282123..3283505 (+) | 1383 | WP_322552255.1 | PepSY domain-containing protein | - |
| AAB109_RS16905 (AAB109_16905) | - | 3283535..3283999 (+) | 465 | WP_043981377.1 | FixH family protein | - |
| AAB109_RS16910 (AAB109_16910) | nucA/comI | 3284140..3284562 (+) | 423 | WP_013057949.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| AAB109_RS16915 (AAB109_16915) | - | 3284703..3285056 (+) | 354 | WP_225049451.1 | DUF1516 family protein | - |
| AAB109_RS16920 (AAB109_16920) | - | 3285097..3285690 (-) | 594 | WP_097822801.1 | hypothetical protein | - |
| AAB109_RS16925 (AAB109_16925) | - | 3285845..3286552 (-) | 708 | WP_241771379.1 | TetR/AcrR family transcriptional regulator | - |
| AAB109_RS16930 (AAB109_16930) | - | 3286524..3287804 (-) | 1281 | WP_322552256.1 | glycosyltransferase | - |
| AAB109_RS16935 (AAB109_16935) | - | 3288100..3288645 (+) | 546 | WP_060745312.1 | GNAT family N-acetyltransferase | - |
| AAB109_RS16940 (AAB109_16940) | - | 3288794..3289279 (-) | 486 | WP_043981373.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 140 a.a. Molecular weight: 15329.17 Da Isoelectric Point: 4.4990
>NTDB_id=980855 AAB109_RS16910 WP_013057949.1 3284140..3284562(+) (nucA/comI) [Priestia megaterium strain IMGN6]
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGSGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGSGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
Nucleotide
Download Length: 423 bp
>NTDB_id=980855 AAB109_RS16910 WP_013057949.1 3284140..3284562(+) (nucA/comI) [Priestia megaterium strain IMGN6]
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATTGACCGAGACGGGGCTGAGGAAAACCGCCGTGAGTCTTTAAAA
GGTATTCCGACTAAAAGCGGCTATGACCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAGCGGTGCTGATAT
TGAATATGTAAAGCCTTCAGACAACCGAGGCGCCGGGTCTTGGATCTCCCATCAAGTAGACGAGTTTCCTGACGGTACGA
AGGTTTTAATTGAAGTGAAGTAA
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATTGACCGAGACGGGGCTGAGGAAAACCGCCGTGAGTCTTTAAAA
GGTATTCCGACTAAAAGCGGCTATGACCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAGCGGTGCTGATAT
TGAATATGTAAAGCCTTCAGACAACCGAGGCGCCGGGTCTTGGATCTCCCATCAAGTAGACGAGTTTCCTGACGGTACGA
AGGTTTTAATTGAAGTGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
61.207 |
82.857 |
0.507 |