Detailed information NTG0980707

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: ACNJZ7_RS05755
• Genome accession: NZ_CP182378
• Coordinates: 1189408..1190400 (+)
• Length: 330 a.a.
• NCBI ID: WP_000081550.1
• Uniprot ID: A0A370V765
• Organism: Escherichia coli strain Br_167_kylling
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 1184408..1195400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNJZ7_RS05725	ispD	1184469..1185179 (+)	711	WP_000246131.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
ACNJZ7_RS05730	ispF	1185179..1185658 (+)	480	WP_001219242.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
ACNJZ7_RS05735	truD	1185655..1186704 (+)	1050	WP_000568924.1	tRNA pseudouridine(13) synthase TruD	-
ACNJZ7_RS05740	surE	1186685..1187446 (+)	762	WP_001295182.1	5'/3'-nucleotidase SurE	-
ACNJZ7_RS05745	pcm	1187440..1188066 (+)	627	WP_000254708.1	protein-L-isoaspartate O-methyltransferase	-
ACNJZ7_RS05750	nlpD	1188251..1189345 (+)	1095	WP_306174120.1	murein hydrolase activator NlpD	-
ACNJZ7_RS05755	rpoS	1189408..1190400 (+)	993	WP_000081550.1	RNA polymerase sigma factor RpoS	Regulator
ACNJZ7_RS05760	-	1190521..1190928 (-)	408	WP_001208066.1	MarR family winged helix-turn-helix transcriptional regulator	-
ACNJZ7_RS05765	-	1191075..1191668 (+)	594	WP_001237173.1	non-oxidative hydroxyarylic acid decarboxylases subunit B	-
ACNJZ7_RS05770	-	1191668..1193095 (+)	1428	WP_177309549.1	non-oxidative hydroxyarylic acid decarboxylases subunit C	-
ACNJZ7_RS05775	-	1193106..1193342 (+)	237	WP_000562982.1	non-oxidative hydroxyarylic acid decarboxylases subunit D	-
ACNJZ7_RS05780	ygbN	1193381..1194745 (-)	1365	WP_000104457.1	GntP family transporter	-

Sequence

Protein

• Length: 330 a.a.
• Molecular weight: 37972.84 Da
• Isoelectric Point: 4.5597

>NTDB_id=980707 ACNJZ7_RS05755 WP_000081550.1 1189408..1190400(+) (rpoS) [Escherichia coli strain Br_167_kylling]
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFA
RRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQ
GLNIEALFRE

Nucleotide

• Length: 993 bp

>NTDB_id=980707 ACNJZ7_RS05755 WP_000081550.1 1189408..1190400(+) (rpoS) [Escherichia coli strain Br_167_kylling]
ATGAGTCAGAATACGCTGAAAGTTCATGATTTAAATGAAGATGCGGAATTTGATGAGAACGGAGTTGAGGTTTTTGACGA
AAAGGCCTTAGTAGAAGAGGAACCCAGTGATAACGATTTGGCCGAAGAGGAACTGTTATCGCAGGGAGCCACACAGCGTG
TGTTGGACGCGACTCAGCTTTACCTTGGTGAGATTGGTTATTCACCACTGTTAACGGCCGAAGAAGAAGTTTATTTTGCG
CGTCGCGCACTGCGTGGAGATGTTGCCTCCCGCCGCCGGATGATCGAGAGTAACTTGCGTCTGGTGGTAAAAATTGCCCG
CCGTTATGGCAATCGTGGTCTGGCGTTGCTGGACCTGATCGAAGAGGGCAACCTGGGGCTGATCCGCGCGGTAGAGAAGT
TTGACCCGGAACGTGGTTTCCGCTTCTCAACATACGCAACCTGGTGGATTCGCCAGACGATCGAACGGGCGATTATGAAC
CAAACCCGTACTATTCGTTTGCCGATTCACATCGTAAAGGAGCTGAACGTTTACCTGCGAACCGCACGCGAGTTGTCCCA
TAAACTGGACCACGAACCAAGTGCGGAAGAGATCGCAGAGCAACTGGATAAGCCAGTTGATGACGTCAGCCGTATGCTTC
GTCTTAACGAGCGCATTACCTCGGTAGACACCCCGCTGGGTGGTGATTCCGAAAAAGCGTTGCTGGACATCCTGGCCGAT
GAAAAAGAGAACGGTCCGGAAGATACCACGCAAGATGACGATATGAAGCAGAGCATCGTCAAATGGCTGTTCGAGCTGAA
CGCCAAACAGCGTGAAGTACTGGCACGTCGATTCGGTTTGCTGGGGTACGAAGCGGCAACACTGGAAGATGTAGGTCGTG
AAATTGGCCTCACCCGTGAACGTGTTCGCCAGATTCAGGTTGAAGGCCTGCGCCGTTTGCGCGAAATCCTGCAAACGCAG
GGGCTGAATATCGAAGCGCTGTTCCGCGAGTAA

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (174-248)

• Sigma-70 region 2 (Sigma70_r2) (94-163)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (56-88)

• Sigma-70, region 4 (Sigma70_r4) (262-315)

3D structure

• AlphaFold DB: A0A370V765

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	73.065	97.879	0.715